KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os12t0497300-00
Entry
Os12t0497300-00   CDS       T02163                                 
Symbol
Os12g0497300, RAD51A2, DNA_REPAIR_PROTEIN_RAD51A2
Name
(RAP-DB) Similar to DNA repair protein RAD51 homolog.
  KO
K04482  DNA repair protein RAD51
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Os12t0497300-00 (Os12g0497300)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dosa04131]
    Os12t0497300-00 (Os12g0497300)
   04121 Ubiquitin system [BR:dosa04121]
    Os12t0497300-00 (Os12g0497300)
   03400 DNA repair and recombination proteins [BR:dosa03400]
    Os12t0497300-00 (Os12g0497300)
Membrane trafficking [BR:dosa04131]
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    Os12t0497300-00 (Os12g0497300)
Ubiquitin system [BR:dosa04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   BRCC complex
    Os12t0497300-00 (Os12g0497300)
DNA repair and recombination proteins [BR:dosa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     Os12t0497300-00 (Os12g0497300)
    RecA family proteins
     Os12t0497300-00 (Os12g0497300)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     Os12t0497300-00 (Os12g0497300)
SSDB
Motif
Pfam: Rad51 RecA AAA_25 HHH_5 ATPase DnaB_C AAA_22 PAXNEB
Other DBs
RAP-DB: Os12t0497300-00
Position
chr12:join(18876115..18876210,18876823..18876965,18877071..18877183,18877298..18877389,18877576..18877670,18877744..18877855,18878038..18878169,18878354..18878472,18878635..18878758)
AA seq 341 aa
MSSSGAAAAAAATAEEAAAGGEHGPFPIEQLQASGIAALDVKKLKDAGLCTVESVVYSPR
KDLLQIKGISEAKVDKIIEGASKLVPLGFTSASQLHAQRLEIIQVTTGSRELDKILDGGI
ETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYIDAEGTFRPQRLLQIADR
FGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFAIMIVDSATALYRTDFSGRGE
LSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGAAMFGPQIKPIGGNIMAHASTT
RLFLRKGRAEERICKVVSSPCLAEAEARFQISPEGVTDVKD
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgtcgtcgtcgggtgcggctgcggcggcggcggcgacggcggaggaggcggcggcgggc
ggggagcacgggccgttccccatcgagcagctccaggcatctggtatagctgcacttgat
gtgaaaaagctcaaagatgctggtctctgcacggtggagtctgtggtctactcaccaagg
aaagaccttctgcaaattaaagggattagtgaagccaaagtcgataagataattgaagga
gcttcgaagctggttccactgggatttacaagtgccagccaacttcatgcacagagactt
gagattatccaagttacaactggatcaagggaacttgataaaatcttggatggtggaata
gaaactgggtccattacagagatatatggtgaatttcgctcagggaagactcagttgtgc
cacactctgtgtgttacatgtcagctcccattggaccaaggtggtggtgagggaaaagct
ttgtatattgatgcagagggcacattcagaccacaaagactcctccagatagcagacagg
tttgggttgaatggtgctgatgtacttgagaatgtagcttatgcaagagcatataatact
gatcatcaatcaagacttttactggaagcagcttccatgatggtggagacaaggtttgct
attatgattgtagatagtgcaacagccttatacagaacagatttctctggtagaggggag
ctgtcagcaaggcaaatgcacctggccaagtttcttaggagccttcagaagttagcggat
gagtttggcgtggcggtggtaatcacgaatcaagttgtggcgcaagtggatggtgctgca
atgtttgggccacagatcaaacctatcggcgggaacatcatggctcatgcttccacaaca
aggctttttcttcgaaagggaagagcggaggagcggatatgtaaggtagtaagctctccc
tgtcttgctgaagctgaggcgaggtttcagatatcaccggaaggcgtcacagatgttaag
gactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system