KEGG T02163: Os12t0632700-01

Oryza sativa japonica (Japanese rice) (RAPDB): Os12t0632700-01

Entry

Os12t0632700-01 CDS T02163

Gene name

Os12g0632700

Definition

Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37).

Orthology

K00026

malate dehydrogenase [EC:1.1.1.37]

Organism

dosa Oryza sativa japonica (Japanese rice) (RAPDB)

Pathway

dosa00020	Citrate cycle (TCA cycle)
dosa00620	Pyruvate metabolism
dosa00630	Glyoxylate and dicarboxylate metabolism
dosa00710	Carbon fixation in photosynthetic organisms
dosa01100	Metabolic pathways
dosa01110	Biosynthesis of secondary metabolites

Module

dosa_M00012	Glyoxylate cycle
dosa_M00168	CAM (Crassulacean acid metabolism), dark
dosa_M00171	C4-dicarboxylic acid cycle, NAD+ -malic enzyme type

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:dosa00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:dosa00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:dosa00630]
Metabolism; Energy metabolism; Carbon fixation in photosynthetic organisms [PATH:dosa00710]

SSDB

Motif

Pfam:

Ldh_1_C Ldh_1_N 3Beta_HSD Semialdhyde_dh NAD_binding_10 DUF3008 THF_DHG_CYH_C

Other DBs

RAP-DB:

Os12t0632700-01

UniProt:

B8BN58

Position

chr12:complement(join(27099200..27099271,27098047..27098262,27097173..27097487,27096985..27097074,27096748..27096831,27096074..27096109,27095895..27095984,27095708..27095802,27094979..27095051))

AA seq 356 aa
MEDAAAAARRMERLASHLRPPASQMEESPLLRGSNCRAKGAAPGFKVAILGASGGIGQPL
ALLMKMNPLVSVLHLYDVVNTPGVTADISHMNTGAVVRGFLGQPQLENALTGMDLVIIPA
GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNVISNPVNSTVPIAAEVFKKAGT
YDPKRLLGVTTLDVVRANTFVAEVLGLDPRDVNVPVIGGHAGVTILPLLSQVNPPCSFTS
EEISYLTTRIQNGGTEVVEAKAGAGSATLSMAYAASKFADACLRGLRGDAGIVECSFVAS
QVTELPFFASKVRLGRCGIEEILSLGPLNEFERAGLEKAKKELAESIQKGVAFINK

NT seq 1071 nt +upstreamnt +downstreamnt
atggaggacgcagcagcagcagcaaggcggatggagaggcttgcctcccacctccgcccg
cccgcttctcagatggaggaatcacccctcctgaggggctccaattgccgggcaaaaggt
gccgctccgggtttcaaggtcgccatcttgggagcgtctggtgggattggccagcctctt
gcattgctcatgaagatgaaccctcttgtttctgtgctccatctgtacgatgttgtcaac
actcccggtgtcacagctgacattagccacatgaacactggtgctgtggtgcgtggtttc
ttgggccagccacagttggaaaatgcccttactggaatggatcttgtgatcattcctgct
ggtgttcctcgtaagcctgggatgacaagggatgatttgttcaacatcaatgccggaatc
gtccggactctttgtgaaggaatcgcaaaatgctgccccaatgcaattgtgaatgtgatc
agcaaccctgtcaattctactgttccgattgctgctgaggtttttaagaaagctgggaca
tatgaccctaagcgccttttgggggtgacgacacttgatgtagtgagagccaatactttt
gtggcagaagttcttgggcttgaccccagagatgtaaatgtccctgtcattggtgggcat
gcaggagtaacaatattaccactcctttcacaggtgaatcctccctgctcattcacctca
gaagaaattagttatcttaccactcgcatacagaatggtgggacagaagtagtcgaggct
aaagctggagcggggtctgcaaccctttcaatggcgtatgcagcttctaaatttgcagat
gcttgcttgagaggattgcgtggcgacgctgggatagtggagtgctcttttgtagcttct
caggtgacagagctgcctttctttgcatccaaagtgcggttaggtcgctgtggcatcgag
gagatcttatcacttggtccattgaatgaattcgaaagagctggactggagaaggctaag
aaggagctggccgagagtatccaaaagggggtcgctttcatcaacaagtga

All links

Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (28)   

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