KEGG   Dendroctonus ponderosae (mountain pine beetle): 109538982
Entry
109538982         CDS       T04899                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
Organism
dpa  Dendroctonus ponderosae (mountain pine beetle)
SSDB
Motif
Pfam: DWNN zf-C3HC4_2 zf-C3HC4_3 zf-CCHC_2 zf-CCHC zf-C3HC4 zf-RING_5 zf-C3HC4_4 U-box zf-RING_2 zf-RING_UBOX
Other DBs
NCBI-GeneID: 109538982
NCBI-ProteinID: XP_019762030
EnsemblRapid: LOC109538982
Position
Unknown
AA seq 1494 aa
MSVHYRFKSALEYDTITFDGLHISIKDLKNAIIQQKRIGKNSDFDLRITNAQTNDVYEDE
NALIPKNTSLLIARIPVTTPKQKQWEGYGGNDTPPAKLDDGGAIGKTVDLANLDAPEDDK
IRAMMSQSTQDYDPSNYVKIRGANQVGPVPQNYRCFKCHQTGHWIKDCTLGQGVEPVEIK
KSTGIPQSFMVPVDGPQVPGAMMMANGQYAVPALDLQAYNQKSSGPAPVQEKKPDIPDDL
LCSICSDLLADAVMIPCCGNSFCDECVRSVLLDSEDHECPDCHEKDISPATLIPNRFLRK
SVANFKNTTGYEKAPTYRAKTRLAREDSFKKDMNSPAEIDSTDKDGLKETRKTIISEADS
TEHNKAEVEVSKDAELDPPKTSDNEGPPGVSPKQSPVHKITSKISKGDRGRDRGHRSNKS
PKHHRSRSPSPRKMRTRRTSPYVNRNSLDRNGTPLRDDTPPTHNSNYPPPPDVYSRPPGE
LLPPIGVMSHGVPPMQGLPPVSMPPGAFVAGQPPPFHSTGAPPNFRMPPPGSQIPPYMPP
GPYQVPNRPVFDPMGGPPPGNFGPSYSGRMRDYGRRSGRDRTPPGLIDDPLAAFNRILRE
KDEKRARLQRMSRRTWSRSRSRSRSFSRSPPPMRRRSRSPKRRRSRSRSRSFSISRSRSR
SYSPSPRGSPLPPLRRSPPPLQTRRGPPGRFRSPLRSPPLRRRIDRIDFERDYERGSFRE
KPRSRRSNSRDRFYNDREREYDRVPIRSSRGLPPPCAAPPPQQWGGQRDVYYPEPPPSGF
QTRFPQQIHHIQPERKYELIAPPGVEQPPIPGLESELPPLNEFDKPQKKLSPRKERHSPR
EHRDRNKSIPREHEREKDRRDRDRRKDEKRSRSRSKTPEKWRNPSPKSSGTPERPRKRRS
STDSKDDKRKDKDRHRDHSEEDKKKIKDKKKHKDKKDDKKKKKDKRDKHKSKDRKDKKEE
FKQIVPKAVEETEETRKKIEEKKKRKGEEELKKQQEERKKEERRLRFIEDEKRKKEEEAK
KEASKQKAIEEARQLLENEERQKLEVKIEEKQEQKKIDLYDEVIPTQDLAKEIRSDFKSP
EPSANMHQAAEPAESTLELFDSMIQKDIEDGEVTEEQEKFQVAAKDGEEEDPGILELHSD
MDIKLDESDILAPFPEKSKWEVDEDGQIQNSPGELRDFSDSKTKVSSEVLKRAENVIFAR
AINSIRPIEIKKITGERAKFFADEKVVEEAKKVEAPVEKPPRIPIKDRLGRKVDEPDSKI
VAQRRSSSPYGRRDRRMEVDKRHDRKRTRGHETNRERDRHRSRSDRSIDKSKKSRKDDKD
KQDEKIRERRKRTRSRSPSEDPKKKKKEKEKEKKPKKEKSKKHDTEKKVKDERGEEKHKS
TVDKRKVTLDEANFEPDYDLELHEDELSEKDSKKGKEARKTDRSDGESSSSEYSSSSSED
ERRRKKRRSHKKKKKRDSSSSESESSSQSSDTDKDRKRKKHRKSKKKKKKAKHK
NT seq 4485 nt   +upstreamnt  +downstreamnt
atgtctgttcattacagatttaaatctgctctggaatatgatacaataactttcgatgga
ttgcacatatcgatcaaagaccttaaaaatgcaattatacaacaaaaacgcattgggaaa
aactcggacttcgatttgagaattaccaatgcccaaactaatgacgtttatgaggacgaa
aatgcattgatccctaaaaacacttcgctactcattgcgagaatacccgtaactaccccc
aagcaaaaacaatgggaaggatatggcggaaatgatactcctcctgccaaattggatgac
ggtggagctattgggaaaacagtggatttagccaacttggacgctccagaagatgacaaa
attcgagctatgatgtcccagagtacgcaagattatgatccaagcaattatgtgaaaatt
cgtggagccaatcaggtgggtcccgttcctcaaaattaccggtgttttaaatgtcaccag
actggccattggatcaaagattgtactttaggacagggagtggagccagttgaaattaaa
aaaagcacgggaataccccaaagttttatggtgcctgtagatggtccgcaggtgcccgga
gctatgatgatggccaatggacaatatgcagttccagctttggaccttcaggcttataat
cagaaatcaagtggccctgcaccggtgcaagagaagaagcccgacattcctgatgacttg
ctttgttcaatttgttcggatttgttagcggatgctgtgatgattccatgttgtggtaac
tctttttgtgacgaatgtgttcgaagcgttctattggacagcgaagaccatgaatgtcct
gattgccacgaaaaagacatttcgccagctactttaatccctaatcggtttctacgcaag
tccgttgcaaattttaaaaacaccaccggatatgagaaagctccaacttacagggctaaa
acccgcttagccagagaggacagttttaaaaaagacatgaattcacctgctgaaatcgac
tcaactgacaaagatggtttgaaagagacgcggaagactattatatctgaagccgattca
acagaacataataaagctgaagttgaggtttcgaaggacgctgaacttgatcctcctaaa
acctcagacaatgaagggccaccaggagtgtcgcccaagcaatctcctgttcacaaaatc
actagcaaaatttctaaaggagatcgaggacgggatagaggacaccgatccaacaaatcc
cctaaacatcatagaagtcgatctccctcaccacgaaagatgagaactcgtcgaacatca
ccttatgtcaaccgaaactctcttgatagaaatggaactccattaagagacgacactccg
ccaacgcataacagcaattatccgccgccacctgatgtgtactcgaggccgccgggtgaa
cttctgcctcctattggcgtcatgtctcatggcgtacctccgatgcagggacttcctcca
gtttccatgccacctggcgcgtttgtagctggtcagccaccaccgtttcattcgaccggt
gctcctccaaattttcgcatgccaccacctggatctcaaattcctccttacatgccacct
ggaccttaccaagtgccaaacaggccagttttcgaccccatgggtgggcctccacctgga
aactttgggcccagttattcaggaagaatgcgtgactatggcagaagaagtggcagagat
agaacacctccggggttgattgacgatccgctagctgcttttaatcgaattcttagagaa
aaggatgagaagcgtgctcggctgcaacgtatgtccaggcgcacttggagtcgaagtcgt
agtcgcagcaggagcttcagtcgctcacccccacctatgcgaaggcgtagtagaagtcct
aagaggcgtaggtcccgcagcagaagtcgctcgttctcaatcagcaggtcgcgttctcgc
tcgtactcgcctagtccgagagggtcaccgctgccgccgttgaggcgatccccccctccc
ttgcaaacgaggaggggacccccagggcggttccgctcacctctcagatcgccacctctc
aggcgacgcattgatcgtatcgatttcgagcgcgactatgaacgaggcagttttcgagag
aaaccaagaagtcgaagatctaacagccgagatcggttctacaacgaccgagaaagggaa
tacgatcgagtaccaattagaagtagcagaggacttcctccaccctgtgctgcacctccg
cctcaacaatggggaggacaacgcgatgtgtattatccagaacctccaccctccggattt
cagaccaggttcccgcagcagattcaccacattcaaccagagcgaaaatacgaactgatt
gccccaccgggagttgaacagccaccaattccaggcctcgaatctgaactgcccccgctt
aacgaatttgataagccgcaaaagaaattgtcgccgcgcaaagaaaggcacagccctaga
gagcatagggatcgaaataagtccattcctagagaacacgagcgggaaaaggatagacgc
gacagggatcgccgcaaggatgagaaacgttctcgatccagatccaaaactccagaaaag
tggagaaatcctagtcccaagtccagcggtacacctgaacggccaaggaaacgacgatct
tcgaccgattccaaagatgacaagcgaaaggacaaagaccggcatagagatcactccgag
gaagataaaaagaaaataaaggacaagaaaaaacataaagacaagaaggatgacaagaaa
aagaaaaaggataagagagacaaacacaagtctaaggatcgcaaagataagaaggaggaa
tttaagcaaatagttcccaaagccgtggaggaaacggaagaaactcgcaaaaaaatcgaa
gaaaagaagaagcggaagggagaagaggaattaaagaaacagcaggaagagcgcaagaaa
gaggaacggcgcctaaggttcattgaagatgaaaaacgcaagaaggaagaagaagccaaa
aaagaggcgtccaagcaaaaagcgatcgaagaagctaggcagcttcttgagaatgaagag
cgccagaaacttgaagttaaaatcgaggagaagcaagaacaaaagaaaattgatctatat
gatgaagtaattcctacacaagacctggccaaagaaattcgtagtgattttaagtcgcct
gaaccttcagctaacatgcatcaagccgcagagccagccgaaagtacattggagcttttc
gattctatgatacaaaaagatatagaggatggcgaagtaacggaagagcaagaaaagttt
caagttgcggcgaaagatggtgaggaggaagaccctggtattctcgagttgcattctgac
atggacattaaattagacgaatcggacatccttgctccgtttccggagaaatctaaatgg
gaagtggatgaagatggtcaaattcaaaacagtcctggcgaactgagggatttctcagac
tcaaaaactaaggtttcaagtgaggtgctgaaacgtgctgaaaacgtcatatttgcgcga
gccattaactcaattcggccaatagaaattaagaaaataaccggagagagggccaagttt
ttcgcggacgaaaaagtggttgaggaagcaaagaaagttgaggcccctgttgagaaacct
ccaaggattcccattaaagataggctgggtagaaaagtagatgaaccagattcaaaaata
gtcgctcaacgaagaagctcatctccatatggtcgtcgggatagacggatggaagtagat
aaacggcatgataggaaacgtacccgaggacacgaaacaaatcgagaaagagacaggcat
agaagtcgaagtgacagaagcatcgacaaaagcaagaaatctagaaaagatgataaagac
aaacaagacgagaaaatcagagaaaggcgtaaacgaacacgttcacgcagtcccagtgaa
gatccaaaaaagaagaaaaaggaaaaagaaaaggagaaaaagcctaagaaggaaaaatct
aaaaagcatgatactgaaaagaaagtaaaagacgaacgcggagaagaaaaacataaatcc
acagttgataaacgcaaggttaccttagatgaggctaactttgagcctgattatgacttg
gaattacacgaagatgaattgagcgagaaagattccaagaaggggaaagaagctcgaaag
actgacagatccgatggggaaagcagcagctctgagtattcgagctccagttctgaagat
gaacggaggcgcaagaagcgcagatcgcacaaaaagaaaaagaagagagatagtagtagc
agtgaatccgagtccagtagccaatcgagtgatacagacaaagatagaaagcgcaaaaaa
cacagaaaatctaaaaagaagaagaagaaggccaaacacaagtaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (189)   
   RefGene (185)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (11)   
   Pfam (11)   
All databases (207)   

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