KEGG   Deinococcus peraridilitoris: Deipe_0228
Entry
Deipe_0228        CDS       T02381                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase Fpg
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
dpd  Deinococcus peraridilitoris
Pathway
dpd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dpd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Deipe_0228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dpd03400]
    Deipe_0228
Enzymes [BR:dpd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Deipe_0228
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Deipe_0228
DNA repair and recombination proteins [BR:dpd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Deipe_0228
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS OrfB_Zn_ribbon Zn-ribbon_8
Other DBs
NCBI-ProteinID: AFZ65830
UniProt: K9ZYJ7
Position
complement(262052..262912)
AA seq 286 aa
MPELPEVETTRRQLAPLLVGRTIVRIEHDGRHRYRDTHLAEGRRVTRLDRRGKYLIAQFE
DDPHESLELIVHLGMTGGFRSATGRHTRVTVHLDDGSALYFQDSRRFGKWAVVRTGEYGS
MPTLQNIGPEPLSEDFDEEAFVTQALNAPVVKTWLLSQGPVAGLGNIYVDEALWRAGIHP
ARTRLAPEEARRLYTAIREVLTEAVEAGGSTLADHTYAQPNGESGWFQFRHNVYARKGKA
CARCGGTIEKIVLGQRGTHFCPECQPHAQPEPGSDAGARARKGRTT
NT seq 861 nt   +upstreamnt  +downstreamnt
gtgcctgaactgcccgaagtcgaaacgacccgacgtcaacttgctccgctgctggtggga
cgcaccatcgtgcggatcgagcatgacggacgccaccgctaccgcgacacgcaccttgcc
gaaggtcgccgggtcactcgtctcgaccgccggggcaagtacctgatcgcgcagttcgag
gacgacccacatgaatccctggaattgatcgtgcacctgggcatgacaggcggctttcgt
tcggcgacgggccgacacacccgcgtgaccgtgcacctcgatgacggcagcgccctctac
tttcaggattcgcgacgctttggcaagtgggcggtcgtccgcacgggcgagtacggcagc
atgcccaccctgcagaacataggccccgaaccgctttcagaagatttcgacgaagaagcc
ttcgtcacacaggccctgaacgcgccagtcgtcaagacctggctgctttcgcaaggtccg
gtggcgggactggggaacatctacgtcgacgaagcactgtggcgcgcgggcattcacccg
gcccgaacgcggctggcgcccgaggaggcgcggcggctgtacaccgcgattcgtgaagtg
ctgaccgaggccgtcgaagccggaggctcgaccctggccgatcacacgtacgcgcagccg
aacggtgaaagcggctggtttcagtttcgccacaacgtctatgcacgcaaaggcaaagct
tgcgcccgctgtggcggcaccatcgagaaaatagtgttgggccagcgcggcacgcatttc
tgtcccgaatgtcagccgcacgctcagcctgagccgggcagcgacgccggggcgcgggcg
cgcaaaggccggacgacatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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