KEGG T01032: Dpse

Drosophila pseudoobscura pseudoobscura: Dpse_GA11455

Entry

Dpse_GA11455 CDS T01032

Definition

GA11455 gene product from transcript GA11455-RA (EC:6.5.1.1)

Orthology

K10777

DNA ligase 4 [EC:6.5.1.1]

Organism

dpo Drosophila pseudoobscura pseudoobscura

Pathway

dpo03450

Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:dpo03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C BRCT mRNA_cap_enzyme

Other DBs

NCBI-GI:

NCBI-GeneID:

FlyBase:

UniProt:

Position

AA seq 916 aa
MDIATTVKFRDVCELFEKVKAAKKVQDKEDVLRSYYESFCRHREAFRQAAGLTDEQSENG
SSSFHSVLRLLLPSADTRRDNYGLQITALGRLYTRVLQLTRDSRDAIMLQHRTGSSFRDY
GDVVYAVLVSRCFNPPSDLRLNAIHEMLDTIANEDTSVKEQELIRFTEQASAREQKWLIR
ILLKSLGLGIGEQRIFGVLHPNAKDIYQRCSDLSHVCNLVADKVSDLKVSDTKITGNSHP
STVNLNAVIRPFHQIRPMLCERFPGDIQELMQSDVLYLETKMDGERFQLHIDRGRFMYLS
RNGVDYSNNFGESYSRGTLTPQLRGLLPLGLQTIILDGEMMVWDTNQKRYREKGENTDVK
NLKPDRSWRPCFVVYDLLYFNGQSLLDLTYIQRSYKLQKLIGEQQGVLQLMRGTKIGSIE
EFNKLFQQALDSNAEGIVLKKQSSIYQPGVRVGGGWYKDKADYIKGLITEFDVLIIGGFY
NRKRTFIDSFLLGVLQPMANSDSRHEVYSIGCVTNNTRQAVVLNHTLRPHWHDTTKEPPP
LWYHYMANEKIGSPDLWIDPHNSIILQVKAADLTPNSAFYTPKALHFPRIELKRDDKAWN
ECMTLQEFNQLCEGSGPIKKLNKRHLCLDDLTTKRKRLRMTPAERRRLGLAIYEKRYDVG
TSSSCTKLFEGLSFCILSGAPGQSKHKLQELAAKNGGCIVENPLPNDPKCFCIAGDQTFL
VKRLMQQQPCTSDIVRMEWLIRVCQEQELELRPKDLLSATEPLQDDLAEWFDKLGDSYTK
DFASVDELLELLQDIGKEELAVNHVSQSEINAFEDKLLGQATRNIFRDLHAYFYDPKGDE
LSKVLFLQNGGTLASESDPQLNLVFVCLSSDIDDNYFESWLHNHLSSYSGEVLNSAWIHQ
SHRERRLLKMSCFSFK

NT seq 2751 nt +upstreamnt +downstreamnt
atggatatagccacaaccgtaaagtttcgtgatgtctgcgagctgttcgaaaaggttaag
gcggcaaagaaagttcaagacaaagaggatgtgctgagaagctactatgagtcgttctgc
cgacatcgggaggcatttcgtcaggcggctggcttaacggacgagcagagtgagaatggc
tccagcagcttccactcggtcctgcgtctcctgttgcccagtgcagacactagaagggac
aactatggcctgcaaataacagctctgggccgtctctacaccagagtgctccagctaacc
agggactctcgcgatgccataatgctgcagcatcgtactggctcctcgtttcgggactac
ggagatgtggtctatgccgtacttgtgtcccgttgctttaatccgccaagcgatctgcgt
ctcaacgccatccacgaaatgctagatacaattgccaatgaagatacatcagttaaggaa
caggaactgatacgcttcacagaacaagcctcggccagggagcagaagtggctaatccga
attctcctaaagtccctgggattgggcataggggagcagcgcattttcggagttctgcat
ccgaatgctaaggacatttaccagcgttgctcagatctaagtcacgtctgtaatttagtt
gccgataaggtatctgacctgaaagtcagcgacacgaagatcacaggcaacagccaccca
tcaactgttaatctgaacgcagtcataaggcccttccatcagatccgtcccatgctttgc
gagcgttttcccggcgacattcaggagcttatgcaatccgacgttctctatctggagacc
aaaatggatggcgagcgtttccagctgcatattgatcgcggtcgattcatgtacctttcc
cgaaacggagtggactattctaacaattttggcgaaagctatagccggggaacgttgacg
ccacaattgcgtggtctgttgccgctcggcctacagacgatcatcctcgatggcgagatg
atggtttgggacaccaaccaaaagaggtatcgcgaaaagggcgagaacacggatgtaaaa
aatctaaagcccgatcgaagctggcggccttgttttgtggtctacgatctactgtacttc
aatggccagagtctgctcgatttgacatacatccagcgatcctacaagctccaaaagttg
atcggcgaacagcaaggagtgctgcagctgatgcgcggtaccaagattggctcaatcgag
gaattcaacaaactcttccagcaagcccttgactccaatgccgaaggcattgttctaaaa
aagcagagctccatctaccagccgggagttcgagtcggcgggggatggtacaaggataag
gcagattacatcaagggtctcataaccgaattcgatgttctcatcattggaggcttttat
aatcgcaagcgcacatttatcgattcgtttctactaggcgttctccagccaatggctaat
agcgacagtcgtcatgaggtttacagcattggttgcgttaccaataatacgagacaagca
gtggtgctgaatcatacgctgaggccacactggcacgataccaccaaggagccgccgcca
ctatggtaccattacatggctaacgaaaagattggctccccggatctgtggatcgatcca
cacaattcgattatcttgcaggttaaggcggcggatttgacacccaatagtgccttctat
acgcccaaagctttgcactttccacgcatcgaactgaagcgcgacgataaggcctggaat
gaatgcatgacgctacaggagtttaaccagctgtgtgagggctctggtccgatcaagaaa
ctgaacaagcgtcacctgtgtttggatgatttgaccacgaaacgaaaacgtctacgcatg
acgcccgcagagcgcaggcgtctaggtctggccatatacgagaagcgctacgatgtcggg
acgagttctagctgcacaaaacttttcgaaggccttagtttctgcatcttgagtggtgcg
ccaggccagagcaagcacaaactgcaagaattggcagccaagaatggtggctgcattgtg
gagaatccgctgcccaacgacccgaaatgcttctgtatagcaggagatcagacgttcctg
gtaaagcgactaatgcagcagcaaccgtgcactagcgatattgtgcgcatggagtggctg
atacgcgtctgtcaggagcaagagcttgagctacgtccaaaagatttgctttcggccacc
gagccactacaggatgatttggccgaatggtttgacaaattaggagacagctatacaaag
gactttgcgagcgttgatgaactgctcgaattactacaggacatcggtaaggaggagctt
gccgtcaaccatgtgtcacagtccgaaatcaatgccttcgaagacaagttgctgggccag
gccacacgaaacatattccgtgacttgcatgcctacttctatgatccaaagggcgacgaa
ctgagcaaagttttgttcctgcagaatggcggcacgctggcaagcgaatccgacccccaa
ctaaaccttgtatttgtatgcctgtcttcggatatagacgataattactttgagtcgtgg
ctacataaccatttaagttcgtattctggcgaagtccttaactctgcatggatccatcaa
tcgcaccgtgaacgccgccttctaaaaatgagttgtttttcgtttaaatag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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