KEGG T01032: Dpse

Drosophila pseudoobscura pseudoobscura: Dpse_GA18999

Entry

Dpse_GA18999 CDS T01032

Definition

GA18999 gene product from transcript GA18999-RA (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

dpo Drosophila pseudoobscura pseudoobscura

Pathway

dpo03030	DNA replication
dpo03410	Base excision repair
dpo03420	Nucleotide excision repair
dpo03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:dpo03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:dpo03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:dpo03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:dpo03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme DNA_ligase_OB_2 Orthopox_A49R

Other DBs

NCBI-GI:

NCBI-GeneID:

FlyBase:

UniProt:

Position

AA seq 744 aa
MQQSITSYFKQKSDVPESPGKARPVSKIKSEIDLAENEPKIKSEDETSEANIEANRIIDP
NPSTIEAMEIKEEPTSKVERKVTTIGLNSTSKDNKEEVENYDPSNEAYHPLEHAYWKAKA
VTPYLALARTFQVIEETKGRLKMIDTLSNFFSSVMLVSPNDLLPSVYLSINQLAPAYEGL
ELGVAETTLMKAICKATGRNLAHIKSQTHLTGDLGIVAEQSRVSQRMMFQPAPLNIRGVF
SKLREIAKISGQSKMTLVYDVFVACRSSEARFFIRSLIGKLRIGIAEQSLLTALAIALVK
KNHINDCKVSKIVDVYKDEITETTLLLKTAYSQCPNYDIIIPAILKYDIKELQERCPMHP
GMPLRPMLAQPTKGVHEVFERFGSMHITCEWKYDGERAQIHCNERGEISIFSRNSENNTA
KYPDLIARSKGFLKGAVQSYIIDSEIVAWDVERKQILPFQVLSTRKRKNVDIEEIKVQVC
VYIFDLLYINGTTLVTSPLSERRKLLLEHFQEVEGEWKFATALDTNDMDEVQQFLEESVK
GNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGTYG
GFLLACYDTENEEYQSICKIGTGFTDEDLRIHSEFLGKHVIPSAKSYFRYDSSLEPDHWF
EPAQVWEVKCADLSLSPIHRAAIGIVDTERGISLRFPRFIRIRDDKSSENATDANQVAHM
YQSQDQVKNNQRTCTQMDMESEFY

NT seq 2235 nt +upstreamnt +downstreamnt
atgcaacagtccataacatcctattttaagcaaaaatccgatgtgccggagagccctggc
aaagccagaccagtttcgaaaattaagtcggagattgatttggctgaaaatgaacccaaa
atcaagagtgaagatgagacctctgaagctaatattgaagcaaaccgtattattgatcca
aatccgagcacaattgaagctatggaaatcaaggaggagccgacaagcaaagttgaacgg
aaagtaacaacaattggactgaactccacatctaaagataacaaagaggaagtggaaaac
tacgatccctcaaacgaagcctatcatcccctggagcacgcatactggaaggccaaagcg
gtgacaccgtatttggcgttagctcgaacgtttcaagtgatagaggagaccaaaggccgc
ctcaagatgattgatacgttaagcaattttttttcctcggttatgttagttagcccaaat
gacttgctgcccagtgtttatctcagtattaaccagctggcccccgcctacgaggggctg
gaacttggtgtggctgagacaacgttaatgaaggcaatctgcaaggcgacgggccgtaac
ttggcacacatcaaatctcaaacgcacttaaccggcgacctgggcattgtcgccgagcag
tcgcgcgtttcgcaacgcatgatgtttcagcctgctccactgaacatcagaggagtattc
agcaagctaagagaaatagccaagatatctggtcagtccaagatgactctcgtctatgat
gtctttgtggcctgtcgatcatctgaggctcgtttctttatacgctccctgatcggcaag
ttgcgcattggcatcgcagagcaaagtcttctcactgctcttgcaattgctttggtgaag
aaaaatcacattaacgactgcaaggtcagcaaaatagtcgacgtttacaaagatgaaata
acggagactacgttattgctgaaaacagcatatagccaatgccccaactacgacattatt
attcctgcaatattgaagtatgacatcaaggagctccaagaacgttgccccatgcaccca
ggcatgccgctgaggccaatgctcgcacaaccaacaaaaggagttcatgaggtgtttgag
cgctttggaagcatgcacataacgtgcgaatggaaatacgacggcgaacgagcccagatt
cactgcaacgagcggggagagataagcatattctctcgcaactcggagaacaacacggcg
aagtatccggatttgattgccaggagcaaaggtttccttaagggtgcagtgcagtcttac
attattgatagcgaaatcgttgcctgggacgttgagcgaaagcagattctgccattccaa
gtactcagtacgcgcaaaagaaaaaacgtggacatagaagagatcaaagttcaagtctgt
gtttacatattcgatcttctgtatattaatggtacgacccttgtcacaagtccattatcc
gagcgccgcaagctgctgctagaacatttccaggaagtcgaaggtgaatggaaattcgcc
acagctctggacactaacgatatggatgaggtgcagcaatttttagaggaatcagttaaa
ggcaattgtgagggactcatggtcaagacattggatgaggaagccacgtatgaaatcgca
aaaagatcaaggaattggcttaagttgaaaaaggattatttgtcaaatgtgggcgactcg
cttgatcttgttgtaattggcggctacaaaggaaagggacgacgaaccgggacctatggc
ggatttctgcttgcctgctatgacaccgaaaacgaggaataccagagcatctgcaaaatt
gggacagggttcactgatgaagatttgcggatacactctgaattcttaggcaaacatgtc
atacccagtgccaagtcatactttagatatgactcaagcctggaaccggaccactggttt
gagccggctcaggtttgggaagtaaagtgcgcagacctctcccttagccccatccataga
gcagccataggcatcgttgacaccgagcggggtatttcgctgcgattcccccgattcatt
cgaattcgagatgataagagcagcgaaaacgcaacagatgccaatcaagtagcccacatg
taccagtcgcaggatcaggttaagaataatcagaggacttgtacacagatggatatggag
agcgagttctactga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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