KEGG T01032: Dpse

Drosophila pseudoobscura pseudoobscura: Dpse_GA20571

Entry

Dpse_GA20571 CDS T01032

Definition

GA20571 gene product from transcript GA20571-RA (EC:3.6.1.3)

Orthology

K03144

transcription initiation factor TFIIH subunit 4

Organism

dpo Drosophila pseudoobscura pseudoobscura

Pathway

dpo03022	Basal transcription factors
dpo03420	Nucleotide excision repair

Module

dpo_M00290

Holo-TFIIH complex

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:dpo03022]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:dpo03420]

SSDB

Motif

Pfam:

Tfb2 Helicase_C_3

Other DBs

NCBI-GI:

NCBI-GeneID:

FlyBase:

UniProt:

Position

AA seq 494 aa
MADTKSGRYASAGSSNSVVPLVQGPANLECKDFQEYLRTRQTAETLEKLYNYPPICLAVF
RELPELARQFIIRILFVDQPVPQAVVTSWGAQRFAKEQTEATSCLSDLNVWRVTAIPGGL
SAWELSPTFKKSVRQVLLGGGKPWPMTNTLEKDSKPRDIAFLDSYAMSRWRCVLHYMVGT
GNRNGTDAEAISPDAVRILLHANLMKRDERDGITITRQGFQFLLLDTRAQVWHFMLQYLD
TCEERGVSLPECLSMLFQLSFSTLGRDYSSEGMNSQMLSFLQHLREFGLVFQRKRKEGRF
YPTRLALNVTSKEAATTMTVSDEEAMQDSGYIVVETNYRVYAYTDSPLQVAVLGLFTELL
YRFPNLVVGVLTRDSVRQALRGGITAEQIVSYLQQYAHPNMKLVESAIQSKSCLPPTVVD
QIKLWEMERNRFTYTEGVVYNQFLSQNDFVTLRDYAQSIHVLVWQNERTRTMVVQKHGHD
DVKRYWKKYSKGGG

NT seq 1485 nt +upstreamnt +downstreamnt
atggccgacacaaaatctgggagatatgccagtgccggcagcagcaatagtgttgtgccc
cttgtgcaggggccggcgaatctggagtgcaaggatttccaggagtatcttcgcactcgc
cagactgccgagacgctggagaaactatacaattatccgccgatttgcctagccgtgttc
cgggagctgcccgaactagccagacagttcattatacgaattttattcgtggatcagccg
gtgccacaggctgtggttacctcctggggggcccagcgatttgccaaggagcaaaccgag
gccaccagctgcctctcggatctaaatgtttggcgtgtgacggccataccaggcggcctg
tctgcatgggagctgtcacccacattcaagaaaagcgttcgccaggttcttttgggcggc
ggcaagccgtggccgatgaccaatacactggagaaagactcgaagccacgtgacatagcc
ttcctggactcctatgccatgtcccgctggcgctgtgtgcttcattacatggtgggaacg
ggaaaccgtaatggcaccgatgcagaagcgatcagtccggatgctgtgaggattctactc
catgcaaatctcatgaagcgcgacgagcgagacggaattacaatcacccgccaagggttt
cagttcctgctgctggacacacgtgcacaggtctggcatttcatgctccagtatttggat
acatgcgaagagcggggagtatctcttccggagtgtctttccatgctgttccagctcagt
ttctccaccctcggtcgagactacagctcagagggcatgaacagccagatgttgtccttc
ctgcagcatttgcgcgagtttggtttggttttccagcggaaacgcaaggagggccggttt
tatcccactcgtcttgccctaaacgtgaccagcaaggaagcggctaccacaatgacagtg
tcagacgaggaggccatgcaggacagtggctacattgtggtagagacaaactatcgcgtc
tatgcctacacggattcccctcttcaagtggcggtcctgggcctgtttaccgagttgctc
tatcgctttcccaacttggtcgtgggcgtgctcacccgcgactctgtgcgtcaggcatta
cgcggcggcatcactgcagaacagattgtctcctatctgcagcagtacgcccaccccaac
atgaaactagtggagtcggccatccagtcaaagtcctgcctgccgcccaccgttgtggat
caaatcaagctctgggagatggagcgcaaccggttcacatacacggagggagtggtatac
aatcagtttctctcccagaacgatttcgtcactctgcgcgactatgcgcagtcgatccat
gtcttggtttggcagaatgagcgcactcgcaccatggtggtgcagaagcatggtcacgac
gatgtcaagcgctattggaagaagtattcgaagggtggcggttag

All links

Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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