KEGG T01032: Dpse

Drosophila pseudoobscura pseudoobscura: Dpse_GA21476

Entry

Dpse_GA21476 CDS T01032

Definition

GA21476 gene product from transcript GA21476-RA

Orthology

K04646

clathrin heavy chain

Organism

dpo Drosophila pseudoobscura pseudoobscura

Pathway

dpo04142	Lysosome
dpo04144	Endocytosis

Class

Cellular Processes; Transport and catabolism; Endocytosis [PATH:dpo04144]
Cellular Processes; Transport and catabolism; Lysosome [PATH:dpo04142]

SSDB

Motif

Pfam:

Clathrin Clathrin_propel Clathrin_H_link Clathrin-link Coatomer_WDAD TPR_1

Other DBs

NCBI-GI:

NCBI-GeneID:

FlyBase:

UniProt:

Position

AA seq 1584 aa
MTQPLPIRFQEHLQLTNVGINANSFSFSTLTMESDKFICVREKVNDTAQVVIIDMNDSTN
PTRRPISADSAIMNPASKVIALKAQKTLQIFNIEMKSKMKAHTMNEDVVFWKWISLNTLA
LVTETSVFHWSMEGDSMPQKMFDRHSSLNGCQIINYRCNATQQWLLLVGISALPSRVAGA
MQLYSVERKVSQAIEGHAASFATFKIDGNKEPTTLFCFAVRTATGGKLHIIEVGTPPNGN
QAFPKKAVDVFFPPEAQNDFPVAMQVSAKYDTIYLITKYGYIHLYDMETATCIYMNRISA
DTIFVTAPHEASGGIIGVNRKGQVLSVTVDEEQIIPYINTVLQNPDLALRMAVRNNLAGA
EDLFVRKFNKLFTAGQFAEAAKVAALAPKAILRTPQTIQRFQQVQTPAGSTTPPLLQYFG
ILLDQGKLNKFESLELCRPVLLQGKKQLCEKWLKEEKLECSEELGDLVKASDLTLALSIY
LRANVPNKVIQCFAETGQFQKIVLYAKKVNYTPDYIFLLRSVMRSNPEQGAGFASMLVAE
EEPLADINQTVDIFMEHSMVQQCTAFLLDALKHNRPAEGSLQTRLLEMNLMSAPQVADAI
LGNAMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHMLNAEWLVSFFGTLS
VEDSLECLKAMLTANLRQNLQICVQIATKYHEQLTTKALIDLFESFKSYDGLFYFLSSIV
NFSQDPEVHFKYIQAACKTNQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDIIKNLILVVKGQ
FSTDELVEEVEKRNRLKLLLPWLESRVHEGCVEPATHNALAKIYIDSNNNPERFLKENQY
YDSRVVGRYCEKRDPHLACVAYERGQCDRELIAVCNENSLFKSEARYLVARRDAELWAEV
LSEANPYKRQLIDQVVQTALSETQDPDDISVTVKAFMTADLPNELIELLEKIILDSSVFS
DHRNLQNLLILTAIKADRTRVMDYINRLDNYDAPDIANIAISNQLYEEAFAIFKKFDVNT
SAIQVLIDQVNNLERANEFAERCNEPAVWSQLAKAQLQQGLVKEAIDSYIKADDPSAYVD
VVDVASKVESWDDLVRYLQMARKKARESYIESELIYAFARTARLADLEEFISGPNHADIQ
KIGDRCFSDGMYDAAKLLYNNVSNFARLAITLVYLKEFQGAVDSARKANSTRTWKEVCFA
CVDAEEFRLAQMCGLHIVVHADELEDLINYYQNRGYFDELIALLESALGLERAHMGMFTE
LAILYSKFKPSKMREHLELFWSRVNIPKVLRAAESAHLWSELVFLYDKYEEYDNAVLAMI
AHPTEAWREGHFKDIVTKVANIELYYKAIEFYLDFKPLLLNDMILVLAPRMDHTRAVSYF
SKTGYLPLVKPYLRSVQSLNNKAINEALNGLLIDEEDYQGLRNSIDGFDNFDNIALAQKL
EKHELTEFRRIAAYLYKGNNRWKQSVELCKKDKLYKDAMEYAAESGKQEIAEELLGWFLE
RNAHDCFAACLYQVGETTLQSIKP

NT seq 4755 nt +upstreamnt +downstreamnt
atgacgcaaccgctacccatccgctttcaggagcatttacagctcacaaacgttgggatc
aacgcaaactcgttctcattcagcacgctcacgatggagtcggacaagtttatttgtgtg
cgcgagaaagttaatgataccgcccaagtagtcatcattgatatgaacgattcgaccaat
cccacacgacgtcccatatcagctgactcggccattatgaatccagcaagcaaagttatt
gctctcaaagcgcaaaagacgttgcagatattcaatattgaaatgaaatcaaaaatgaag
gctcacacgatgaatgaagatgttgtgttctggaaatggatatctttgaacactttagca
ttggtgaccgagacgagcgtttttcattggtctatggaaggtgactcgatgccacaaaaa
atgtttgatagacattcctcactcaatggctgtcagataatcaattatcgctgcaatgct
acacaacaatggctgcttctggtaggcatatcggcacttcccagccgcgtcgccggcgcc
atgcagttgtattccgtggagcgtaaagtatcgcaggccatcgaaggtcacgcagccagt
tttgcgacttttaaaatagacggaaacaaggaaccgactacgcttttttgctttgcagtt
cgcaccgccacaggcggcaagcttcacatcattgaagtcggaacgccgcctaatggcaac
caggcttttccaaaaaaggctgttgacgtcttctttccaccggaagcccagaacgacttt
ccagtggccatgcaggtctcagcgaagtacgataccatctatttgataaccaaatatgga
tatattcatctgtacgatatggagaccgccacatgcatatacatgaatcgcatatcggcc
gatacaattttcgtgaccgctccgcacgaggccagcggtggaattattggcgtcaaccgc
aagggtcaggtgctatctgtaactgttgacgaagagcagatcattccttatataaacact
gttttgcaaaaccctgacttggccctgcgaatggctgtacgaaacaatttagcaggagcg
gaggatctttttgtccgcaagttcaacaagctgtttactgccggtcagttcgccgaagcg
gccaaagttgctgctctggcccccaaggccattcttcgcactcctcagaccattcaacga
tttcaacaagtgcaaacaccagcaggctcgacgacgccacctctactgcagtactttggt
attctgctcgaccagggcaagttaaacaagtttgagtccctggagctgtgtcgtccagtt
ctgctgcaaggaaagaagcaactttgcgaaaaatggctaaaggaggagaaacttgagtgc
agcgaagaactaggtgatctcgttaaagcctcagacctcacgctagcgctctccatttac
ttgcgtgccaatgttcccaataaagtgattcagtgttttgcagaaactggacagtttcaa
aaaattgtgctttatgccaagaaggttaactatacaccagactacatttttctgctgcgt
tcggtgatgcgtagcaatcccgagcaaggtgctggttttgcatctatgcttgtagcagag
gaagagcctctggcggacattaatcagactgtcgatatcttcatggaacactctatggta
caacagtgcacggcttttttgttagatgcccttaagcacaatcgcccggccgagggttcg
ctgcagacgcgtttgcttgaaatgaatctcatgtctgccccacaggtggccgacgctata
cttggtaatgctatgttcacccactacgatagggcacacatcgcccagctgtgtgaaaaa
gcaggtttgttgcagcgtgctctggagcactacacagatctgtacgatataaagcgggct
gtcgtacacacgcatatgctgaatgctgagtggctggttagcttctttgggactttatcg
gtggaggactctctggaatgtctgaaggctatgttaacagcaaatctgcggcagaattta
caaatctgtgtacaaattgccaccaagtaccacgagcagttgaccaccaaggcgctaatt
gacctatttgagagctttaagagctacgacggactgttctatttcctgagcagtattgtg
aacttctcacaggatccagaggttcactttaaatacattcaagccgcctgtaagacaaac
cagataaaagaggtggaacgaatttgtcgcgaatctaactgttataacccggagcgcgtg
aagaatttcttgaaggaagctaaactgactgatcaactgccgctgattattgtttgtgat
cgttttgactttgtccatgatctggtgctttacttataccgcaacaatctccaaaagtat
atagagatctatgtgcagaaggtaaacccttctcgcttgccggttgttgtgggtggtttg
cttgacgtcgactgcagtgaggatattatcaaaaatctcatactagtggtcaagggtcag
ttctctacggatgagctggtggaggaggttgaaaagcgtaatcgcttaaagctcctactt
ccctggcttgagtctcgggtccacgaaggctgcgttgagcccgccacacacaatgccttg
gccaagatttacattgattcaaataacaacccagaacgtttcctcaaagaaaatcagtac
tacgacagccgcgtggtcggtcgctactgtgaaaagcgtgatcctcatctggcctgtgtt
gcctacgaacggggccagtgcgatcgcgaattgatcgctgtctgtaacgaaaactcacta
tttaaaagtgaagctcgttatctagtggctcgacgtgatgccgaactctgggcggaggtc
ctgtccgaagctaatccatacaagcgccagttgattgatcaagtcgttcagacggcactg
tctgaaacacaggatcccgacgatatttcggtaacagtaaaggcatttatgactgctgac
ttgccgaatgagctgattgagctgctggaaaagatcatattggactcttcggtgttcagc
gaccatcgcaatcttcagaatctgctcatactcactgctattaaagctgatcgtacacgc
gttatggattatataaaccgactggacaattacgatgcacccgatatagccaacattgcg
attagtaatcaattgtatgaggaggcatttgccatattcaagaagttcgatgttaatacg
tcagccattcaggtgctcattgatcaggtcaacaatttggagagagccaacgagttcgcc
gagcgctgtaacgagccagccgtatggtcacagttagccaaagctcaactacagcagggt
ttagtgaaggaggctattgattcatatataaaggccgatgatccgagtgcttacgtggac
gtggttgacgtggctagtaaggtggaatcgtgggacgaccttgttcggtatcttcaaatg
gcacgtaaaaaagcgcgtgagtcctatattgagagtgaattaatttacgcttttgctcgc
actgctcgtttggccgatctcgaagagttcatatcgggtcccaaccacgcagacatacag
aaaattggagatcgctgtttcagtgacggaatgtacgatgctgcaaagctcctatataat
aatgtcagcaactttgcccgtttggctattacactggtatatcttaaggagtttcagggt
gctgttgactcggcgcgaaaggctaactcgacgcgcacatggaaggaagtttgttttgct
tgcgtagatgctgaagaatttcggctagcgcagatgtgtggcctacatattgttgttcat
gctgatgagctagaggatttgattaattattaccagaatcggggatatttcgatgagctg
atagcactacttgagtctgctctgggcctagagcgtgcgcatatgggaatgtttactgag
ttggccatactctactcaaaatttaaaccatcaaaaatgcgagaacacctagaactattc
tggtcccgcgttaacataccaaaagttctgcgagctgccgagtccgctcatctctggtcg
gagctagtgttcctttacgataagtatgaggaatatgacaacgctgtgctggccatgatt
gctcacccgactgaggcatggcgcgagggacactttaaggacatcgtaacaaaggtggca
aatattgagttgtactacaaggccatcgaattttatttagactttaagccgttgctgctg
aacgatatgattttagtgctggctccccgaatggatcatactcgagctgttagctacttt
tccaagaccggctacttgccgttggtcaagccctatttgcgctccgtacaatcccttaat
aataaagctatcaatgaagctcttaatggtctcttaatcgacgaggaggactaccaaggt
ctacgcaattcgatcgatggtttcgacaactttgacaacattgcgctggctcagaagctt
gagaagcatgagctcacagagtttcgtagaattgctgcatacttgtataaaggaaataac
cgttggaaacaaagcgttgagctgtgtaaaaaggataaactttacaaggatgccatggag
tatgccgctgagtctggaaagcaagagattgctgaagagttgttgggatggttccttgag
cggaatgcacacgattgctttgcggcatgtctttatcaggtgggagaaacaacattgcag
tccataaaaccctaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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