KEGG T01413: Despr

Desulfobulbus propionicus: Despr_0748

Entry

Despr_0748 CDS T01413

Definition

DNA polymerase I (EC:2.7.7.7)

Orthology

K02335

DNA polymerase I [EC:2.7.7.7]

Organism

dpr Desulfobulbus propionicus

Pathway

dpr00230	Purine metabolism
dpr00240	Pyrimidine metabolism
dpr01100	Metabolic pathways
dpr03030	DNA replication
dpr03410	Base excision repair
dpr03420	Nucleotide excision repair
dpr03440	Homologous recombination

Class

Metabolism; Nucleotide metabolism; Purine metabolism [PATH:dpr00230]
Metabolism; Nucleotide metabolism; Pyrimidine metabolism [PATH:dpr00240]
Genetic Information Processing; Replication and repair; DNA replication [PATH:dpr03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:dpr03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:dpr03420]
Genetic Information Processing; Replication and repair; Homologous recombination [PATH:dpr03440]

SSDB

Motif

Pfam:

DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_5 NYN DUF2765

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(824041..826725)

AA seq 894 aa
MTTPELYLIDGSAYIYRAYHAIKPLSNSHGLPTHAIFGFTAILRRLIKERNPRYLAVAFD
TKGPVFRHRLYGQYKANRPPMPEDLIPQIPYIRKMVAAYRILNLEHEDQEADDLIASVAK
KMAGQGYRVVIVSGDKDLLQLVSPGITLWDPMNDRVMDEAAVEEKYGLPPSLLLDYFALT
GDSSDNIPGVPGVGPKSAQKLIAEHRSLEGLYAVVASLKPSKIIQQIRDNRDAAFLSREL
VRLNTSAETPGDLEQYRLPEPDIEALRALLLELEFHSLLKEETRPARIDTSRFHLVRHQE
QLAALAERLAGASLVAVDTETDSLDPLKARLVGVSLCTEDGEAWYLPCGHRDEAGELVAG
QLPLDRLIEFLRPVLEHPGTTKIGHNLKFDLAVLSAPCNGGIQLACPLHDTMIGAWLLAP
DRRTYKLDDLCGEINLRMTSYEEVTHADKSEDAFCRVPLEAAKNYSCEDVYGALRLYQEQ
LPQLERADLLALLREVEGPLVPVLAAMEREGIRVDADKLARLSAEFDRRLRTDELSIYQA
AGMSFNINSPKQLGEVLFEKLQLPKGRKTKTGWSTDVKVLENLSFDHELPALILQYRNLA
KLKSTYVDKLASLRNPRTGRVHTSFNQCGTATGRLSSSSPNLQNIPIRTEEGRRIRSAFI
AADGCLLLAADYSQIDLRVLAHYSQDRELIAAFQGGQDIHRRTAAEIFNVSPELVTAEMR
RVAKTINFGIVYGMSSFGLSSQLHVSRKDAQLFIDRYFAHFSGIKDFMASTIQQAKKDGF
VTTLLGRRRPLAEINSANRVQREFAERTAINTPIQGTAADIIKLAMLRIHRELLRRDFRA
RMLLQIHDELVLEVPETELDPVSRLLKDSMESAMPLRVPLVVQLRHGTSLDKDE

NT seq 2685 nt +upstreamnt +downstreamnt
atgaccacccctgaactgtacctgatcgatggcagcgcctatatttatcgcgcctatcat
gccatcaaaccgctctccaattcgcatggcctgccgacgcacgctattttcggcttcacc
gccatcctccgccgcctgatcaaagaacgcaatccccgctatctagcggtcgcctttgat
accaagggaccggtcttccgccaccggctctacggccaatacaaagccaatcgaccgccg
atgcccgaggatctgatcccgcagatcccctacatccgcaaaatggtcgcggcctatcgc
attctcaacctggaacacgaggatcaggaggctgatgatctgatcgcctcggtcgcaaag
aagatggccggacaggggtatcgggtggtgatcgtttccggcgacaaggatctgctccaa
ctggtatcgccgggcatcaccctgtgggatccgatgaacgatcgagtaatggatgaagcc
gcggtggaggaaaagtacggactgcctccgtccttgctgctcgattacttcgccctgacc
ggagacagttcggataacatacccggcgtacccggcgtcggccctaaatcggcacaaaaa
ctgattgccgagcatcgaagcctggaaggattgtatgcggttgttgccagcctgaaacct
tccaaaatcatccagcaaatccgcgacaatcgagacgcggcctttctgtcgcgggaactg
gtgcggctcaacacctccgccgaaacccctggcgatcttgaacagtaccgcttgcccgag
cccgacatcgaggcactgcgggccttgctgctggaactggaatttcactccctgctcaag
gaagagaccagaccggcccgcatcgatacttcccgttttcatttggttcggcaccaagaa
cagttggcggcactcgctgaacgccttgccggggcatccctggtggctgtcgacacagaa
accgactccctggatcctctcaaagcccggcttgtgggggtatcgctttgcaccgaggac
ggggaggcctggtaccttccctgcggccatcgcgacgaggcgggtgaactggttgcgggc
caactcccccttgaccggctcatcgaatttctccgcccggtgctcgaacatcccgggacc
accaaaatcggccacaatctgaaattcgatctggctgtcctgtccgccccctgcaatggc
ggcatacagctggcctgtccgctccacgacaccatgatcggtgcctggctgctggctccg
gaccggcgaacctacaaactcgacgatctttgcggtgagattaacctacggatgaccagt
tacgaggaagtcacccatgccgataaaagcgaggacgccttttgtcgagttcccttggag
gccgccaagaactatagctgcgaggacgtatatggggcactgcggttgtaccaggagcag
ctgccgcaactggaacgggccgatctgctggcgctgcttcgggaggtcgaagggccgctg
gtccccgtgctggccgccatggagcgagaagggatccgggtcgatgcggataaactcgcc
cgcctctcagccgaattcgaccgccgcctgcgcaccgatgaactgtccatttaccaggcc
gccggcatgtccttcaacatcaactcccccaagcagttgggcgaagtcctgttcgagaaa
ttgcaactccccaagggacgcaaaaccaaaaccggctggtccaccgacgtcaaggtcctg
gaaaacctcagtttcgaccatgaactgccggcattgatccttcagtatcgcaatctggcc
aaactcaaatcgacctatgtcgacaaactggcgagcctgcgcaatcctcgcaccggccgg
gtccatacctcgttcaatcagtgtggcaccgccacaggacgcctcagttcgagcagcccc
aatctgcagaatattcccatccgcaccgaggagggacgccgcatccggtcggcctttatc
gccgccgacggctgcctgttgctggccgcagattattcgcagattgatctgcgcgtgttg
gcccattactcccaggatcgcgaattgatcgccgcctttcaaggtggtcaagacattcat
cggcgcacggcggcagagatcttcaacgtctcccccgagctggtcaccgccgagatgcgg
cgagtggccaaaaccatcaatttcggcattgtttacggcatgtccagctttggtctgtcc
agtcagctgcacgtcagtcgcaaggatgcccagctctttatcgatcgttatttcgcccat
ttttccggaataaaggatttcatggcgtcaacgatccaacaagctaaaaaggatggcttc
gtcaccaccctgctcggtcgccgccgcccgctcgccgagatcaacagcgccaatcgcgtg
cagcgcgagttcgccgaacggaccgccatcaacacccctattcaaggcacggccgccgac
attattaaactggccatgctgcggatacatcgtgaactgctgcgacgcgatttccgcgcc
cgcatgttgctgcaaattcatgatgaattggtcctcgaggtgccggaaaccgagctggat
cccgtctctcgcctgctgaaggactccatggaatcggccatgcccctccgggtaccgctg
gtggtgcaactgcgccacggcacgagcctcgacaaggacgagtaa

All links

Pathway (7)   
   KEGG PATHWAY (7)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-DPR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (33)   

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