KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_193044
Entry
DAPPUDRAFT_193044 CDS       T04347                                 
Name
(GenBank) cyclin H-like protein
  KO
K06634  cyclin H
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03022  Basal transcription factors
dpx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    DAPPUDRAFT_193044
  09124 Replication and repair
   03420 Nucleotide excision repair
    DAPPUDRAFT_193044
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dpx03021]
    DAPPUDRAFT_193044
   03400 DNA repair and recombination proteins [BR:dpx03400]
    DAPPUDRAFT_193044
Transcription machinery [BR:dpx03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     DAPPUDRAFT_193044
DNA repair and recombination proteins [BR:dpx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     DAPPUDRAFT_193044
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB Phyto_Pns9_10 MetOD2 dnstrm_HI1420
Other DBs
NCBI-ProteinID: EFX86471
JGI: Dappu1_193044
UniProt: E9G2Q3
Position
Unknown
AA seq 328 aa
MFATSTQRSFWMFKDENDVSNARLSANIKYISSRGRNMTAEERELQFLNVTEEKILIMSY
EYQLRDFCRKFLPPMPRYVIGTALHYLKRFYVNNSVMDYPPKEILVTCVYLACKVEEFNV
SMDQFVGNLKGDREKAASIILNNELLLMQQLDYQLTVHNPFRPLEGLMIDMKTRFPTFSD
PERLRSGIDEFLEQVFYTDAILIYSPSQISLAAIIHSASTSKENVDEYITKILFSEDQKR
LLNLIEAVKKIRVMVRNVQTPHRDVIKALEKKLQLCCNTDNNSESPAFKKRMKQSFDDEE
SFEDGQYPSADSDQVRSMLMGMSEMGKI
NT seq 987 nt   +upstreamnt  +downstreamnt
atgtttgcaacgagtacccagcgtagtttttggatgtttaaagatgaaaatgatgtttct
aatgcccggctcagtgccaacataaaatatatttcaagccgagggagaaatatgactgct
gaagagcgagaactccagtttttgaacgtgacagaggaaaaaattttgattatgagttat
gaataccagctcagagacttttgcagaaaattcctccctcctatgcctcgctatgtgata
ggaacagctttgcactacctaaagcgtttctacgtcaacaattctgtcatggactatcca
cccaaagagatccttgttacttgtgtctacttggcttgcaaagtggaagagttcaatgtt
tctatggatcaatttgttgggaacctgaaaggagacagagagaaggctgcttccattatt
ttgaacaatgaacttcttctaatgcaacaacttgactatcaattgactgtccataatcct
tttcgaccgcttgaaggcttgatgattgacatgaaaacaagatttccaaccttcagtgac
cctgagagactgagatcaggaattgatgaattcctcgaacaagttttttacactgacgct
attttgatctactccccgtctcaaatttctctggcagccatcattcattccgcgagcact
tctaaggaaaatgttgacgaatacattacgaaaattttgttttccgaagaccagaaacgc
ttattaaatctcatagaagcagtgaaaaaaatccgtgtgatggtgcggaacgttcaaaca
cctcatcgagatgtcatcaaagctttggaaaagaagcttcaactctgctgcaataccgac
aacaacagtgaaagcccagcattcaagaagaggatgaagcaatcttttgacgacgaagaa
tctttcgaagatggacagtatccgtccgccgactctgatcaagttcgcagtatgttaatg
ggaatgtccgaaatgggtaaaatttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (39)   

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