KEGG T04347: DAPPUDRAFT

Daphnia pulex (common water flea): DAPPUDRAFT_227396

Entry

DAPPUDRAFT_227396 CDS       T04347

Name

(GenBank) hypothetical protein

K14570

RNA exonuclease [EC:3.1.-.-]

Organism

dpx Daphnia pulex (common water flea)

Pathway

dpx03008

Ribosome biogenesis in eukaryotes

Brite

KEGG Orthology (KO) [BR:dpx00001]
09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    DAPPUDRAFT_227396
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dpx03009]
    DAPPUDRAFT_227396
Ribosome biogenesis [BR:dpx03009]
Eukaryotic type
  Pre-60S particles
   RNases
    DAPPUDRAFT_227396

SSDB

Motif

Pfam:

AAA_27 DUF294_C

Other DBs

NCBI-ProteinID:

EFX72671

JGI:	Dappu1_227396

UniProt:

E9H6J0

Position

Unknown

AA seq 732 aa
MSGEVMSRKRAARIERRKSRVAAIFKLDEKPEEITTAQKEEQGDEPPEKQLQLSQLSDEE
YKALRTKLRERNRLTQLGLTASLNVPKASRIPVLVTDVQTLFLYTIIGDSRYDHYKWCSL
NKWNNLTQTLILIVEDVSVDELENNTDVFSETLTIFEDVVEMSNPASDGFSLDLALAYVP
LSYAMKRRVMEGYPSLQAACKDGYIYGVTDSPVQENTDKLSAESHSSEIPTINSEQIVSG
LKEKTTEAETERDSEKTSRNCLSNNTEEGNVATGDMMSEEKRQCNESVLIKIDVASTVQE
QANSNEITSSNGGTCLDIITQEDKSKCSRLELLLNASQLISELYPLPGNEECRNFVFTQN
KYDPVTDQSPMFSIDCEWCICVDGSYGLARVAVVDENLKTLYHTYVKPDLAIADYLTRYS
GITEELLLDVKKTPSDVQQDLRNLLPPDAILVGQSLQSDLKALKMFHPYIIDTSVIFNMT
GTRSFKSKLKVLAASFCGRRIQDSSDGHDPTEDAIAAMELVQKKMKMGTEFGDVILIRDS
FPHSSAEGNNQDNLIHMKLFTFIQSHNKSATLITTHPSVEKSYRPGLLKLNSAVVKRKKD
EESLAEPVQMLAASDLSEAVTVTSRSRFNNNFTLVHTSLEKGELDRKAKLKELDKAIVEI
YHGVSVNGMMIVIFGGKTNPGQNGACLDFPNILQKIWSLAGNGLVVSFCLACLYKLYTYI
ALFFILRAQNFE

NT seq 2199 nt +upstreamnt +downstreamnt
atgagtggtgaagtgatgtcaaggaaaagagctgcacggattgagcgacgtaaatcccga
gtggcagcaattttcaaactcgacgaaaagccagaggaaataacgactgcacagaaagaa
gaacaaggagatgagccaccagagaagcagttgcagttgagtcagttgagtgacgaagaa
tacaaagcacttaggacgaaactcagggaaagaaacagattgacacagttgggcctcact
gccagtttgaatgtccccaaggcttctcgcattcctgttcttgtgactgatgttcaaacc
cttttcttgtatactattattggggattcccgctatgaccactataagtggtgcagtctt
aacaaatggaataacctgacacaaacactgattttgattgttgaagatgtatcagtggat
gagttagaaaacaatactgacgttttctcagagactctgacaatttttgaagatgtagta
gaaatgagtaatccagcaagtgatggctttagtcttgatcttgccttagcctatgtacca
ctcagttatgcaatgaagagaagagtcatggaaggctatccttccttgcaagctgcctgt
aaggatgggtacatatatggagttactgattcaccagttcaagaaaatactgataaatta
tctgctgaaagccattcatcagagattccaactataaattcagaacaaattgtttcagga
ttaaaagaaaaaacaacagaggcagaaaccgaaagagattcagaaaaaacaagtaggaac
tgcttgtcgaataacaccgaagagggaaatgtagcgacgggtgatatgatgagtgaggaa
aaaaggcagtgcaacgaatcagttctgataaaaattgatgtagcctcaacagtacaggag
caggctaattcgaacgaaataacgtcttcaaacggcggtacatgcttagatatcattacc
caggaagacaaaagcaaatgtagtcgactggagttgttgttaaacgcctctcaacttatc
tccgaactgtatcctttgcctggcaacgaagagtgtcgcaattttgttttcactcagaat
aaatacgatcctgtcactgatcagtcacccatgttttcgatagactgcgaatggtgcatt
tgtgttgatggatcatatggtttggctcgcgtggctgttgtcgatgaaaacctgaaaact
ttatatcacacttacgtcaaaccagatttggcgattgcggattaccttacgagatattcg
ggaattaccgaagagttactcctggatgttaagaagaccccttctgatgttcagcaggat
ttacgaaatttgttaccccctgacgccattcttgttggccaatctctacagtctgattta
aaagccttaaaaatgtttcatccgtacatcatcgacacttccgtgattttcaatatgacc
ggcacgcgttccttcaaaagcaaactcaaagtgttggcggcttcattctgtggccgtcgc
attcaggattcttcagatggtcatgacccgacagaagatgcaattgctgcaatggagcta
gtacaaaagaagatgaaaatgggaacagaatttggagatgttattctaattagggattcc
tttcctcattcgtcagcggagggaaataaccaggataatctcattcatatgaagctcttt
actttcatccaaagtcacaacaagagtgcaacgttaatcaccacacacccttctgtagaa
aagtcttatcgcccaggattacttaaactcaattcggctgttgtcaagagaaaaaaagat
gaagaatcattggcagagcctgttcaaatgctcgctgctagtgatttaagtgaagccgta
acagtaacatcacgttcacgtttcaacaacaacttcacccttgttcatacttctttggaa
aaaggagagctggaccgcaaagcgaaattgaaagagctagacaaagccattgtggaaata
taccatggagtttctgtgaatggaatgatgattgttatatttggggggaaaactaatcct
gggcagaacggagcttgtcttgattttcccaatatcttgcagaagatctggtctctggct
ggaaatggattggtcgtcagcttttgtttggcttgtctgtataagctttacacttacatt
gcactcttctttattctcagagctcaaaactttgaatga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (47)   

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