KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_244975
Entry
DAPPUDRAFT_244975 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13]
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DAPPUDRAFT_244975
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpx03019]
    DAPPUDRAFT_244975
   03036 Chromosome and associated proteins [BR:dpx03036]
    DAPPUDRAFT_244975
Messenger RNA biogenesis [BR:dpx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     DAPPUDRAFT_244975
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     DAPPUDRAFT_244975
Chromosome and associated proteins [BR:dpx03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    DAPPUDRAFT_244975
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 AAA
Other DBs
NCBI-ProteinID: EFX79335
JGI: Dappu1_244975
UniProt: E9GMB1
Position
Unknown
AA seq 450 aa
MAEAVASQPSLVANNHALSPMRPSPQPLIAKQENNSDNFWKSQLKIPPKDRRKQTSDVTN
TKGTSFEDFCLKRELLMGIFEKGWETPSPIQEVGIPMALTGRNILARAKNGTGKTGAYCI
PVLEQVVPSEQHIQALIVVPTRELALQTSQICIELAKHLDIRIMVTTGGTDLKDDIMRIF
GKVHVVIATPGRVLDLMEKKIAVMDRCKVLVLDEADKLLSQDFMGMLDRIISFLPAKRQI
LLYSATFPVTVEEFMRKHIDNPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQ
INQSIIFCNSTQRVELLAKKITELGYSCYYIHARMQQAHRNRVFHDFRNGLCRNLVCSDL
FTRGIDIQAVNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRFALHRIESEL
STEIKPIPKVIDKSLYVAEFQEDSEEQSGK
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggcagaagccgttgctagtcagccaagcttagtggccaacaatcatgccctttcgccg
atgagacccagtcctcagccgctaattgcgaagcaagagaataactctgacaatttctgg
aagtctcagttgaagatcccacccaaggatcgtagaaaacagactagcgatgttaccaac
actaagggaacaagttttgaagacttttgtctgaagcgtgaattgttgatgggtatcttt
gaaaagggatgggagacaccttcacccattcaagaggttggaattcctatggctctgact
gggcgtaatatcctggctcgtgctaagaatggaactggaaaaacaggtgcttattgtata
ccagttttggaacaagtagttccgtctgagcagcacattcaagcattaattgttgtgcca
acacgtgaactggcattgcaaacaagccaaatctgcattgaactagctaaacatttggat
attcgtatcatggtgactactggtggtactgacctgaaagatgacattatgagaatcttt
ggaaaagttcatgttgtgattgccactcctggtcgtgttttggatctgatggaaaagaag
attgcggtaatggaccgttgtaaggtccttgttttggatgaggctgataaactgctctct
caagacttcatgggaatgttggatcgtataatttcgttcctaccagccaagcgccaaatt
ttgctttattcggcaactttccctgtaactgtcgaggagtttatgaggaaacacattgat
aacccatatgaaatcaatttgatggaagaactaacactgaaaggtgtcacgcaatactac
gctttcgtccaggaacggcaaaaagtgcactgcctcaatacgctgttttctaaattgcag
atcaatcaaagtattatcttctgcaactccactcaacgtgtggaacttttggctaagaag
atcactgagctgggctactcgtgctattacattcatgcccgtatgcagcaagctcacaga
aaccgcgtcttccatgatttccgcaatgggctttgccgtaacctcgtgtgctccgatttg
ttcactcgtggtatcgacattcaagctgtgaacgtggtcatcaacttcgacttccccaag
atggctgaaacttacctgcacaggattggtcgttcgggtcggtttggacacctgggtatt
gctatcaatctgattacttatgaagatcgtttcgccctgcatcgcattgagagtgaactt
agcactgaaatcaagcccattcctaaggtcattgacaaatccctctacgtggccgagttc
caagaagattccgaggagcaatcaggaaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (194)   
   KEGG ORTHOLOGY (1)   
   RefGene (190)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (206)   

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