KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_312843
Entry
DAPPUDRAFT_312843 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K14327  regulator of nonsense transcripts 2
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03013  Nucleocytoplasmic transport
dpx03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    DAPPUDRAFT_312843
   03015 mRNA surveillance pathway
    DAPPUDRAFT_312843
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpx03019]
    DAPPUDRAFT_312843
Messenger RNA biogenesis [BR:dpx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     DAPPUDRAFT_312843
   mRNA cycle factors
    P-body specific factors
     DAPPUDRAFT_312843
SSDB
Motif
Pfam: MIF4G Upf2 Utp13 PEX11 HsbA
Other DBs
NCBI-ProteinID: EFX86765
JGI: Dappu1_312843
UniProt: E9G1S1
Position
Unknown
AA seq 1159 aa
MESTSELPDDCSLVLDEEEKESLALKNFKEAIAEIEGHFTQKAKLRSRIHATIQNRPEES
HFSKLDSSIKKNTAFVRKLKNFTEAQKESILKDINTLNLTKYISEVANAIVEAKLKMTDI
ASILQVCVVLHEKYVDFAPQILEAWQKVLSLKKDEKISNPSKMRVDVRFYADLISCGVLT
PKEGLPLLGSFLTNLIHGDKEEHNSATIILAFCKFCGEDYAGLVSQKLLNDAERFKIAIP
TSNWLPADKRQNVRNLLREYYTSLCKHLTQDHKELQNFERQNRRILQTKGELSNERKEKQ
EILNQSFTKLLNMTQQFADILAEELPELRQDLSPRDEECSVLELCENMSDQARETLNELL
WENEEGRQFYENLPNLSVYLPNLIPKVTAETLPPPDPVEQMIDIEKEAKEIEEGEQVKDE
GDEDIKPAELEDEKEDADVPVSLQSNKVLLDSFLTTLTACVNREMIDSAAIEFSTNLNTK
HNRKKLVRALFTVQRTRLDLLPFYSRLVATLHPYIPEVATDLCNFLRQDFKYHVRKKDQI
NIETKVKIVRFIGELTKFGMYPRADALQCFKQLLLNFAHHYIEMTCHLLETCGRFLLHQP
DSHQRTKVYLDQMMRKKSMLASDSRYLTMIENAYYQVVPVDSSARSSHIKIRPPLHQYIR
QLLFVELGNKGSTNKILKQLRKLNWKDPEVASYAVRCLTSAWKVKFPNIRTLAGVVAELT
LYQEFVGHRIVDAVLEDIRWSLEFPISKFNQRRVSMAKYLAELYNYRMVESSVVFKVLYT
CITFAVSFDYNIESDLDQPDNLMRLRLVLTILDTCGVFFSSGLSKKRLDYYLVYLQYYYL
FKRSLPIWTDDNPFPVAIDFGIKDMLLTLRPKLKAYKTLQEAADAVENLEKELMNKLSQA
MPELQMDVVLADDTLACIEEEDMEEGEEMREVDDDSINDEQSLSRSMSQMTTRGETTQPD
EDTHNVEDDRCVVTAPRKALCPEDDDFMAALDRMVAENIHDAYTRGKEVSKPPAVDIAIP
WQVKASLKRPDGSDKNFLGDSIGGELGGALAVAEASSACAALASSPPSAVHDNPTVNFFL
MTRKGNKPQFKNLAVPSDSELAQNLRNREEAEKAEKERVKKLTLDFNERQEEEEFQDLYG
GVNRPAVHNVNRDRRGRFQ
NT seq 3477 nt   +upstreamnt  +downstreamnt
atggaatctacctctgagctacctgatgactgttctcttgtattggatgaagaagagaaa
gaatccttagccttgaaaaatttcaaagaagcaatagcggaaattgagggtcattttact
caaaaagcaaagcttcgtagtaggattcatgcaacaattcaaaatcgtccagaagaatcc
catttttcgaaattagattcaagcattaaaaagaacacagcatttgtaagaaagctaaag
aactttacagaagctcaaaaagaaagcattttgaaggacatcaacacactgaacctgacc
aaatacatcagtgaagttgccaatgcaattgttgaagcaaaattaaaaatgacagatatc
gccagcattctgcaagtgtgtgttgtccttcacgagaaatatgttgactttgccccccaa
attctagaagcatggcaaaaagtgctttccttgaagaaagatgaaaagatttcaaatccc
agtaagatgagagtcgatgtccgattctatgcggatttgatatcgtgcggagttttgacc
cctaaagaaggtcttcctttactcggtagttttcttaccaatttgattcatggcgacaag
gaagaacataacagcgccaccatcattcttgctttctgcaagttttgcggggaggactac
gcaggtctcgtttctcaaaaattgttgaacgatgctgaacgcttcaaaatagctattcca
acgagcaattggctgccagctgacaaacgccaaaatgtcagaaacctcctgcgtgaatat
tatacgtctctctgtaaacatcttactcaggatcacaaagaacttcaaaacttcgagaga
caaaatcggcggatcttacaaacgaaaggagaattaagcaacgaaagaaaagaaaagcag
gagattttgaatcaaagttttacaaaacttttgaatatgacccaacaatttgctgacatc
ttggctgaggagttacccgagcttcgacaagatctaagtcccagagacgaagagtgttct
gtgctggagctgtgcgagaacatgtcagatcaggcacgcgaaactcttaatgaactcctg
tgggagaacgaagaagggcgacagttctacgaaaatcttcctaatctgagcgtttatctc
cccaacttgattcccaaagtcaccgcagaaactcttcctcctcccgatcccgtcgaacag
atgattgatatcgaaaaagaagcgaaagaaatagaagaaggcgagcaagtcaaagatgaa
ggcgatgaagatatcaaacctgccgagttagaagatgaaaaagaggatgcagatgttcca
gtcagtcttcaatcaaataaagtgctactggatagttttcttacaactctgacagcttgc
gtcaatcgtgaaatgatcgactcagctgccattgagttttctacaaatctaaacacaaaa
cacaatcgcaagaaactcgttagggctctatttactgttcagcgaactcgattggatctc
ttgccattctactctcgactggtggccactttgcatccttatatccctgaagttgcgaca
gatttgtgcaacttcctcagacaagacttcaaatatcatgttcggaaaaaggatcaaata
aatatcgagaccaaggtgaaaattgttcgtttcataggcgagctaacaaaatttggcatg
tacccacgcgcagatgcattgcaatgttttaaacagcttttgctaaactttgcccatcat
tacattgaaatgacgtgccatctgcttgagacgtgcggacgattcctgcttcaccagcca
gattcccatcaacgcacaaaagtctacttggatcaaatgatgcgaaagaaatcgatgttg
gcgtcggactcgcgctatctgacgatgattgagaatgcttactaccaagtcgttcccgtg
gatagcagtgctaggagtagtcacatcaaaatccgtcctccgctccatcaatacatccgc
caacttctttttgtcgagcttggaaacaaaggatctacaaataagatcctcaaacaactt
agaaagctcaactggaaggatcctgaagtagcatcttatgctgttcgctgtttaacttca
gcgtggaaggtcaagtttcctaacattcgtacattagctggggtcgtggccgagttgaca
ctctatcaggaattcgttggtcaccggatagtcgatgccgtgttggaggatatacgatgg
agtttagagtttcccatatcgaaattcaatcaaaggcgcgtgagcatggcaaaatatttg
gccgagctctacaactaccgcatggttgaatcatcggtcgtcttcaaagttctgtacact
tgcatcacgttcgcagtcagtttcgattataatatcgaatcggatttggatcagccagat
aaccttatgcgtttacgattagtcttgaccatccttgacacatgcggagtctttttcagt
tcgggattgtctaaaaaacggttggactattacttggtttatctacagtactactatttg
ttcaaaagatctttgccgatctggactgatgacaatccatttccagtagcaattgatttt
ggcattaaggacatgctgttgaccctgcgtccgaaattgaaagcttataaaaccctgcaa
gaagctgccgatgcagtggaaaatctggagaaggaactgatgaataaactttcacaagct
atgccagaattgcagatggacgtggtacttgccgatgatacgttggcctgcatcgaagaa
gaggatatggaggaaggcgaagaaatgcgtgaagtggacgacgactctatcaatgatgag
caatcgctttctcgttccatgtctcaaatgaccacacgtggtgaaaccacccaaccggac
gaagacacgcacaacgtcgaagacgaccgctgtgtggtaacagcacctcggaaagcgctt
tgtcccgaagatgacgatttcatggccgctctagatcgtatggtggccgagaacattcac
gatgcatacactcgcggcaaggaagtcagcaaaccacctgccgtcgatattgccatccct
tggcaggttaaggcatcgctcaaaagacctgatggatcggataaaaattttctgggcgat
tccattggaggtgaattgggaggtgccttggcagttgctgaagcttcttccgcctgtgcc
gccctcgcttcgtctcctccttcagcagtccatgacaatcctacggtgaatttcttccta
atgacgcgtaaaggcaataagccacagttcaagaatctggcggtgccttcggactctgag
cttgcacagaatctacggaatcgtgaagaggccgaaaaagcggagaaggaacgtgtgaaa
aagttgacactggatttcaatgaacgccaggaagaagaagagttccaggatttgtacggc
ggagtaaatcgtccagctgttcacaacgtcaatcgcgatcgccgaggtcgtttccag

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