KEGG   Diaphorobacter nitroreducens: BA022_04075
Entry
BA022_04075       CDS       T04937                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
dpy  Diaphorobacter nitroreducens
Pathway
dpy03030  DNA replication
dpy03430  Mismatch repair
dpy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dpy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BA022_04075
   03430 Mismatch repair
    BA022_04075
   03440 Homologous recombination
    BA022_04075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dpy03032]
    BA022_04075
   03400 DNA repair and recombination proteins [BR:dpy03400]
    BA022_04075
Enzymes [BR:dpy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BA022_04075
DNA replication proteins [BR:dpy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BA022_04075
DNA repair and recombination proteins [BR:dpy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BA022_04075
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: ASI67828
UniProt: A0A2Z2LI87
Position
889708..893247
AA seq 1179 aa
MFVHLRLHTEFSVVDGTTRIDEVVKAAAKDGQPALAITDLNNLFGAIKFYKEGRGKGVKP
ILGAEIYLEGEAAGAPSRMVLLVQNRTGYLNLSELLARAWTRNIVRNQALCTWEWLQELG
DGLIALAGAQAGPVGQALMKGDDAGAARLALRLAGIFPHRFYLEVQRAGRPDDEAHVTAA
VQLAARLALPVVATHPVQFATPDDYEAHEARVCIAEGEILANPRRVRRFTREQYFKSSAE
MEALFADVPSALANTVEVAKRCNVSLVLGKPQLPNFPIPGGMTMEQYFRHASHEGLEERL
LHLYPDTAERDRQRPRYQERLEFELGTILKMGFPGYFLIVGDFIQWAKKNGCPVGPGRGS
GAGSLVAYALKITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQANRDRVIDYVKDKYGK
EAVSQIATFGTMAAKAAIRDVGRVMDMSYTFCDGISKLVPGKPGQTYTLAYPPEPKKEGD
KNNYALELEPILYERVRKEEDVRTIIEMAQKLEGMTRNIGMHAGGVLIAPGKLTDFCPLY
QQPGSESAVSQYDKDDVEAIGLVKFDFLGLATLTILEIAREFIMQRHKGQENFAFENIPL
DDAATYKLFSDGKTEAVFQFESRGMQGMLKEARPSRLEDLIALNALYRPGPMDLIPSFVN
RKHGKEVVEYPHPLVEPVLAETYGIMVYQEQVMQTAQVLGGYSLGGADMLRRAMGKKKAE
EMAEHRAIFRKGAAEKGISQDKADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTGWLKVHY
TAEFYCANMTVEMDDTDKLKVLYEDAVKHFGMTFEPPDINRGNYRFEPVTDKVIRYGLGA
VKGTGQQAIEAIIAAREGQGVGPQGATRGPFKSLFDFCVRVDRTRVNKRTVEALIKAGAF
DALQLNRAALVASLDRAFEFANAQIANANQGGLFDMMGDDAIGSSTQEPDLVDVMPWGIK
ERLMQEKTAVGFYLSGHLFDEVHQEVRRFVRTAIDELVDSRETQVVAGIVSDYRIINGQR
GRLALFKLDDKSGVIEASADEGLINANAGLLKDDEFVVVSGRLQLDHFSGGLRMKVQQVW
DLAGARARYGRYLQVCLGQQLPDIGALVRDYPPQREETEHGEVLAHGLRVRMQLRCTAAA
GAATAEVQLGEASRFFPSDAALAAWSAQAGSGAVNVVYE
NT seq 3540 nt   +upstreamnt  +downstreamnt
atgtttgtccacttgcgcttgcacactgaattttccgtcgtggacggaaccacccgtatc
gacgaggtcgtgaaggcggcggcgaaagacggccagcccgccctggcgatcacggacctg
aacaacctgttcggcgcgatcaagttctacaaggaaggccggggcaagggcgtcaagccc
atcctgggcgccgaaatctacctggagggcgaagcggcaggcgcaccctcgcgcatggtg
ctgctggtgcagaaccgcaccgggtatctgaacctctccgaactgctggcccgcgcgtgg
acgcgcaacatcgtcaggaaccaggcgctgtgcacctgggagtggctgcaggaattgggc
gacggcctgattgccctcgctggagcgcaggctgggcccgtggggcaggcgctcatgaag
ggcgatgacgccggagctgcgcggctggcgctgcgtctggcgggtattttcccgcaccgc
ttctacctggaggtccagcgcgccggacgacctgacgacgaagcccatgtcaccgccgcg
gtgcagcttgccgcgcgcctggccctgccggtggtagccacccacccggtgcagttcgca
acgccggacgattacgaggcgcacgaggcgcgtgtgtgcattgccgagggcgagatcttg
gcgaatccgcggcgcgtgcgccgtttcacgcgcgagcagtatttcaagagcagtgccgag
atggaagcgctgttcgccgatgtacccagcgcgctcgccaacaccgttgaggtggccaag
cgctgtaatgtgtcgctggtgctgggcaagccgcaactgccgaacttccccattccgggc
ggcatgactatggagcagtacttccgccacgcgtcccatgagggcctggaggagcggctg
ctgcacctgtacccggacaccgccgagcgcgaccgccagcgcccccgctaccaggagcgg
ctggagtttgaactgggcacgatcctgaagatgggatttcccggctacttcctcatcgtg
ggtgacttcatccagtgggccaagaagaacggctgcccggtgggccccgggcgcggctcg
ggtgcgggctcgctcgtggcctatgcgctcaagatcacggatctggatccgctgcaatac
aacctgctgttcgagcgcttcctgaaccccgaacgggtgtccatgcccgacttcgacatc
gatttttgccaggccaaccgcgaccgggtgatcgactatgtgaaggacaagtacggcaag
gaggccgtgagccagatcgccaccttcggcacgatggcggccaaggctgccatccgcgac
gtggggcgggtgatggatatgagctacacgttctgtgacggtatctcgaagctggtgccc
ggtaaacccggccagacctatacgctggcctacccgccagagcccaagaaggaaggggac
aagaacaactacgccctggagttggaacccatcctgtacgagcgcgtgcgcaaggaggag
gacgtgcgcaccatcatcgagatggcgcaaaagctcgaagggatgacgcgcaatattggc
atgcacgccggcggcgtgctgatcgcgccgggcaaactgaccgatttctgcccgctgtac
cagcagccaggcagcgaatcggcggtgagccagtacgacaaggacgacgtggaggccatc
ggcctggtgaaattcgacttcctgggcttggcgacgctgaccatcctggaaatcgcgcgt
gagttcatcatgcagcgtcacaaagggcaggaaaacttcgcgttcgagaacattcccctg
gacgatgctgcgacctacaaactgttctcggacggcaagacagaagccgtgttccagttt
gaaagccggggcatgcaaggcatgctcaaggaagcgcgcccaagcaggctggaagacctg
atcgccttgaatgccctgtaccggccgggccccatggacctgattcccagcttcgtgaac
cgcaagcacggcaaggaggtggtggagtacccgcatccgctggtggagcccgtgctggcc
gagacctacggcatcatggtctaccaggagcaggtgatgcagacggcgcaggtgctgggt
ggttactcgctcggcggcgccgacatgctgcgccgcgccatgggcaagaaaaaggccgag
gaaatggccgagcaccgtgccatcttccgcaagggtgcagccgaaaagggtatcagtcag
gacaaggccgacgaggtcttcgacctgatggaaaagttcgcgggttacggcttcaacaag
tcgcacgccgccgcctattcgctgctggcctaccacaccgggtggctcaaggtgcactac
acggcggagttttactgcgccaatatgaccgtggaaatggacgacaccgacaagctcaag
gtgctctatgaagatgcggtcaaacatttcggcatgaccttcgagccgccggacatcaac
cgcggcaattaccgcttcgagccggtgacggacaaggtcatccgctatggcttgggcgca
gtcaagggcacgggacagcaggcgatcgaggccatcatcgctgcacgcgaagggcagggc
gtgggcccacagggcgcaacccgggggcctttcaagagcttgtttgacttttgcgtacgc
gtggaccgcacgcgcgtcaacaagcgcacggtggaggcgctcatcaaggcgggcgccttc
gatgccctgcagctcaaccgtgccgcgctcgtggcatccctcgatcgggcgttcgagttt
gccaatgcgcagatcgccaacgccaaccaaggcgggctgttcgacatgatgggcgatgac
gccatcggctccagcacgcaggagcctgatctggtggatgtgatgccctggggcatcaag
gaacggctgatgcaggagaagaccgcggtgggcttctacctctcgggccacttgttcgat
gaagtgcaccaggaagtgcgccgcttcgtgcgcaccgctatcgacgaactggtagacagc
cgcgagacgcaggtggtagccggcatcgtgagcgactaccgcatcatcaacgggcagcgc
ggcaggctggcgttgttcaagctggacgacaagtcgggcgtcatcgaggcttccgccgac
gaagggctgatcaacgcgaacgccggcctgctcaaggacgatgaattcgtagtggtgagt
ggtcggctgcagttggaccacttcagcggaggcctgcgtatgaaggtgcagcaggtctgg
gatttggcgggtgcgcgggcacgctatgggcgctatctgcaggtgtgcctggggcagcag
ttgccagacatcggggcgctggtgcgtgactatcctccgcaacgggaggagacagaacac
ggcgaggtgcttgcccatggcctgcgcgtgcgcatgcagttgcgctgcacagcggcggcc
ggcgcggccacggccgaggtgcagttgggagaggccagcaggttctttcccagcgatgcc
gcgctggccgcgtggagcgctcaggcgggcagcggtgctgtgaatgtggtctatgagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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