KEGG   DRUG: D01209Help
Entry
D01209                      Drug                                   

Name
Novobiocin sodium (JAN/USP);
NB;
Albamycin (TN)
Formula
C31H35N2O11. Na
Exact mass
634.2139
Mol weight
634.6062
Structure
Mol fileKCF fileDB searchJmolKegDraw
Source
Streptomyces caeruleus [TAX:195949]
Activity
Antibacterial
Remark
Same as: 
Comment
Natural product
Target
DNA gyrase inhibitor [KO:K02469 K02470]
Interaction
Transporter inhibition: SLC22A6 [HSA:9356], SLC22A8 [HSA:9376]
Drug interaction
Brite
Antiinfectives [BR:br08307]
 Antibacterials
  Nucleic acid synthesis inhibitor
   type II topoisomerase (DNA gyrase, topoisomerase IV) inhibitor [KO:K02469 K02470 K02621 K02622]
    Others
     Novobiocin
      D01209  Novobiocin sodium (JAN/USP)
BRITE hierarchy
Other DBs
CAS: 
1476-53-5
PubChem: 
LigandBox: 
NIKKAJI: 
KCF data Show

ATOM        45
            1   C8y C    23.5387  -13.9584
            2   C8y C    23.5387  -15.3531
            3   C8y C    22.3329  -13.2669
            4   O7x O    24.7503  -13.2495
            5   C8y C    24.7563  -16.0503
            6   C8x C    22.3329  -16.0561
            7   C8y C    21.1331  -13.9584
            8   C1a C    22.3272  -11.8896
            9   C8y C    25.9678  -13.9467
            10  C8y C    25.9794  -15.3588
            11  O1a O    24.7563  -17.4333 #-
            12  C8x C    21.1331  -15.3531
            13  O2a O    19.9388  -13.2728
            14  O6a O    27.1549  -13.2552
            15  N1b N    27.5863  -15.9616
            16  C1y C    18.7520  -13.9641
            17  C5a C    28.7862  -15.2703
            18  C1y C    18.7520  -15.3588
            19  O2x O    17.5402  -13.2728
            20  C8y C    29.9804  -15.9616
            21  O5a O    28.7862  -13.8930
            22  C1y C    17.5402  -16.0620
            23  O1a O    19.9447  -16.0446
            24  C1z C    16.3462  -13.9641
            25  C8x C    29.9862  -17.3446
            26  C8x C    31.1615  -15.2760
            27  C1y C    16.3462  -15.3588
            28  O7a O    17.5402  -17.4450
            29  C1a C    15.5253  -12.5275
            30  C1a C    14.9223  -14.2416
            31  C8y C    31.1673  -18.0361
            32  C8x C    32.3615  -15.9559
            33  O2a O    15.1462  -16.0446
            34  C7a C    16.3403  -18.1306
            35  C8y C    32.3674  -17.3389
            36  C1b C    31.1673  -19.4121
            37  C1a C    13.7399  -16.0503
            38  N1a N    16.3346  -19.5008
            39  O6a O    15.1462  -17.4393
            40  O1a O    33.5614  -18.0175
            41  C2b C    32.3674  -20.1037
            42  C2c C    32.3674  -21.4808
            43  C1a C    33.5614  -22.1724
            44  C1a C    31.1673  -22.1724
            45  Z   Na   36.4428  -16.9586 #+
BOND        47
            1     1   2 2
            2     1   3 1
            3     1   4 1
            4     2   5 1
            5     2   6 1
            6     3   7 2
            7     3   8 1
            8     4   9 1
            9     5  10 2
            10    5  11 1
            11    6  12 2
            12    7  13 1
            13    9  14 2
            14   10  15 1
            15   16  13 1 #Up
            16   15  17 1
            17   16  18 1
            18   16  19 1
            19   17  20 1
            20   17  21 2
            21   18  22 1
            22   18  23 1 #Down
            23   19  24 1
            24   20  25 1
            25   20  26 2
            26   22  27 1
            27   22  28 1 #Down
            28   24  29 1
            29   24  30 1
            30   25  31 2
            31   26  32 1
            32   27  33 1 #Up
            33   28  34 1
            34   31  35 1
            35   31  36 1
            36   33  37 1
            37   34  38 1
            38   34  39 2
            39   35  40 1
            40   36  41 1
            41   41  42 2
            42   42  43 1
            43   42  44 1
            44    7  12 1
            45    9  10 1
            46   24  27 1
            47   32  35 2

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