KEGG T00025: DR

Deinococcus radiodurans: DR_2063

Entry

DR_2063 CDS T00025

Definition

polynucleotide phosphorylase/polyadenylase

Orthology

K00962

polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]

Organism

dra Deinococcus radiodurans

Pathway

dra00230	Purine metabolism
dra00240	Pyrimidine metabolism
dra03018	RNA degradation

Class

Metabolism; Nucleotide metabolism; Purine metabolism [PATH:dra00230]
Metabolism; Nucleotide metabolism; Pyrimidine metabolism [PATH:dra00240]
Genetic Information Processing; Folding, sorting and degradation; RNA degradation [PATH:dra03018]

SSDB

Motif

Pfam:

RNase_PH RNase_PH_C S1 PNPase KH_1 KH_3

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

1:2076870..2079302

AA seq 810 aa
MPQLKGRAGAGASAFRWMFLSPEQPQARLPPMIGKTFTTMLGGRELSIETGKLAKLVSGS
VTVRYGDTLLLVTAQASDTQSKLDFLPLTVEFEERHYAVGKIPGSFQRREGRPGEKAILS
ARITDRQIRPLFPKGYRHETQVIITVLSADGQNAPDVLGPIGAAAALSISDIPWAGPTAC
VRVGQIDGQYVVNPTTEQLTRSRMDLVVAGTREAVMMVECGAQTVSEDDLVGAIEFAHAE
MQGVIALIEQMRAEVGHEKFNFLAEEGPANDYVPELTEKAKAAGLRDALLTHGKKDRSAR
LKALRNGLIEGYVPDPTAEGSAELTQALKDAFGKVEKRELRRLILEENLRADGRDSKTVR
PIWIEARPLPTAHGSAVFTRGETQVLGVTTLGTERDEILIDDLTAESGDKFLLHYNFPPY
STGEVKRMGGQSRREIGHGNLAKRAIRAVLPSFEEFPYVIRVVGDVLESNGSSSMGTVCA
GTLSLMDAGVPLKAPVAGVAMGLVMEGDNYRVLTDILGLEDALGDMDFKVCGTAEGVTAL
QMDIKVGGITPQIMREALAQAKEGRLHILGKMAEVLAAPRAELSPTAPHILSLKINPELI
GKVIGPGGKQVRELEAMGAQVTIEEDGTVRIFSASGESAEAVKARIEAVTKEAKVGEEFE
GTVVKIAPFGAFVNLFPGQDGMLHISQLSEQRVENVEDVLTVGDKLKVKIANIDDRGKID
LIRPELEGKVPLREPRAPRGGDRGPRRDSDRGGDRGPRREFSDRGPRPEGARSERPEGQR
TERPATAPATQESSQSSDAPAAPVFPRRED

NT seq 2433 nt +upstreamnt +downstreamnt
atgccgcagcttaaaggccgggcgggggcgggcgcgtccgcctttcggtggatgttcctt
tccccggagcaacctcaggctagactgccccccatgattggaaagacctttaccacgatg
ctcggcggacgcgaactgagcatcgagacgggcaagctcgccaagctggtgagcggcagc
gtgaccgtgcgctacggcgacaccctgctgctggtgaccgcccaggccagcgacacccag
agcaagctcgactttttgccgctgacggtggaattcgaagagcgccactacgccgtgggc
aagattcccggttcctttcagcgccgcgagggccgccccggcgaaaaggccattctctcg
gcgcgcatcaccgaccgccagattcgcccgctgtttcccaagggctaccgccacgaaacg
caggtcatcatcacggtgctttccgccgacggccagaacgcgcccgacgtgctggggcca
attggcgctgccgccgcgctgagcatcagcgacattccctgggccggcccgaccgcctgc
gtgcgcgtgggccagatcgacggccagtacgtggtcaaccccaccactgagcaactcact
cgcagccgcatggacctggtggtggcgggcacccgcgaggccgtgatgatggtggagtgc
ggcgcccagacggtcagcgaggacgatctggtcggcgccatcgaattcgcgcacgccgag
atgcagggcgtgattgccctgatcgagcagatgcgcgccgaagtcggccacgagaagttc
aactttctggccgaggaaggccccgccaacgactacgtgcccgaactcaccgagaaggcc
aaagctgccggcctgcgcgacgcgctgctcacgcacggcaaaaaggaccgcagcgcgcgg
ctcaaggcgctgcgcaacggcctgatcgagggctatgtgcccgaccccaccgccgagggg
agtgccgaactgacccaggcgctcaaggacgctttcggtaaggttgagaagcgcgaactg
cgccgcctgattctggaagaaaacctgcgcgccgatggtcgcgactccaagaccgtgcgg
cccatctggatcgaggcgcggcccctgcccaccgcccacggcagcgcggtgttcacgcgt
ggcgagacgcaggtgctgggcgtgaccaccctgggcaccgagcgcgacgagatcctgatc
gacgacctgactgccgaaagcggcgacaagttcctgctgcactacaacttcccgccctac
tccaccggcgaggtcaagcgcatgggcgggcagtcgcgccgcgaaatcgggcacggcaac
ctcgccaagcgtgccatccgggcggtgctgccctctttcgaggagtttccctacgtgatt
cgcgtggtgggcgacgtgctggagtccaacggcagcagctcgatgggcactgtgtgcgcg
ggcaccctttcgctgatggacgcgggcgtgccgctcaaagccccggtcgcgggcgtggcg
atgggcctggtgatggaaggtgacaactaccgcgtgctgaccgacatcctgggtctggaa
gacgcgctgggcgacatggacttcaaggtctgcggcaccgccgagggcgtcacggcgctg
caaatggacatcaaggtgggcggcatcaccccgcagatcatgcgtgaggcgctggcgcag
gccaaggaaggccgcctgcacatcctgggtaagatggccgaggtactggccgccccgcgc
gccgaactctcgcccaccgcgccgcacatcctgagtctgaaaatcaaccccgaactgatc
ggcaaagtcatcggccccggcggcaagcaggtgcgcgaactcgaggcgatgggcgcacag
gtcaccatcgaggaagacggcaccgtccgcattttcagcgcctcgggcgaaagcgccgaa
gcggtgaaggcccgcatcgaggccgtaaccaaggaagccaaggtcggcgaggagttcgag
ggcaccgtggtcaagattgcgcccttcggcgccttcgtgaacctgttccccggccaggac
ggcatgctgcacatctcgcaactcagcgagcagcgcgtggagaatgtcgaggacgtgctg
acggtgggcgacaagctcaaggtcaaaattgccaacatcgacgaccggggcaagatcgac
ctgatccgcccggaactcgaaggcaaagtgccgctgcgtgagccccgcgccccgcgtggt
ggcgaccgtggcccccgccgtgacagtgaccggggaggggaccggggaccgcgccgcgag
ttcagcgaccgtggcccacgtcctgaaggtgcccgctccgaacggcctgaaggccagcgt
acggagcgtccggcaacggctcccgcgactcaggaaagcagtcagagcagtgacgcaccc
gctgcgccagtcttcccgagacgcgaggactga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

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