KEGG T01004: 100535241

Danio rerio (zebrafish): 100535241

Entry

100535241 CDS T01004

Definition

thrombospondin-2-like

Orthology

K04659

thrombospondin 2/3/4/5

Organism

dre Danio rerio (zebrafish)

Pathway

dre04145	Phagosome
dre04510	Focal adhesion
dre04512	ECM-receptor interaction

Class

Environmental Information Processing; Signaling molecules and interaction; ECM-receptor interaction [PATH:dre04512]
Cellular Processes; Transport and catabolism; Phagosome [PATH:dre04145]
Cellular Processes; Cell communication; Focal adhesion [PATH:dre04510]

SSDB

Motif

Pfam:

TSP_C TSP_3 TSP_1 VWC EGF_3 EGF_CA EGF Laminin_G_2

Other DBs

NCBI-GI:

NCBI-GeneID:

Ensembl:

Vega:

Position

AA seq 1176 aa
MILRSNLCLWPLLLLCIRALPQDGLVEDESIFDLFKISGISRKTIGAKLFKGHDWDSPAY
RFIRFDHIPAVSTPALHQILKQVQNNEGFVFVATMRQDKGSRGTLLGVEGPGGLRQLEIV
SNGRANTLDLVYMVKGSQNVVSFEDVDLSDSQWKNISLYVHGENAHLYVGCSLIDSVILD
EPFYELLRPEGSQMFVAKGSIRENHFRGLLQNVQFLFDTPIENILRNKGCEIAKPEEVNV
VNESTESVSVGTSISTNFIGEKEKIASDVCERSCEELSNMVQELKGLRIIVGNLIDGLQK
VTEENTVMKEVLGNMKNIKDKRMCWQDGRLFEDKEDWVVDSCTKCTCQESKIVCHQITCP
PVACASPTFLDGECCPLCLHPKDSEDGWSPWSEWTECTVTCGTGTQQRGRSCDATSNPCS
GPSIQTRRCSLGKCDSRVRQDGGWSLWSPWSSCSVTCGEGQITRIRHCNSPVPQLGGKDC
EGSGRETQKCEAKPCPIDGAWGPWSPWAVCSVTCGGGTRTRTRVCNSPRPQYGGKKCPGD
SVDTNACNKQDCPVDGCLSNPCFGGVECTSSPDGSWECGPCPLGFRGNGKVCEDVNECDM
VPDLCYKVGDSQRCVNTDPGFHCLPCPPRYKGNQPFGMGVEAAKLNKQVCEQENPCKEKT
HNCHRSAECIYLGHFSEPMFKCECKIGYAGDGLICGEDSDLDGWPNQNLVCGANQSYHCK
KDNCPKLPNSGQEDFDKDGQGDACDKDDDNDGIMDETDNCPLLYNPRQFDYDKDLVGDRC
DNCPYEHNPAQIDTDGNGEGDACAVDIDGDEVLNENDNCPYMYNTDQKDTDMDGVGDQCD
NCPLLHNPEQTDSDNDRVGDECDNNQDIDEDGHQNSLDNCPYIPNANQADHDKDGKGDAC
DSDDDNDGVPDDKDNCRLVPNKDQRDSDGDGRGDACKDDFDNDSIPDFMDVCPENDAISN
TDFRKFQMVHLDPKGTAQIDPNWVVRHQGKELVQTANSDPGIAVGFDEFNAVDFSGTFYV
NTDRDDDYAGFVFGYQSSGRFYVVMWKQITQTYWEDNPSKAIGISGVSLKVVNSTTGTGE
HLRNALWHTGDTPGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGKQIMAD
SGPVYDQTFAGGRLGLFVFSQELVYFSDLKYECRDN

NT seq 3531 nt +upstreamnt +downstreamnt
atgatactcaggagtaacctctgcttgtggcctttgctgttactatgtatcagagcacta
cctcaagatggccttgtggaagatgaatcaatcttcgatctcttcaaaatcagcggcatt
agcagaaaaacgattggagccaagctcttcaagggccacgactgggactcaccggcatat
cgtttcatccgctttgaccacatcccagctgtgagcaccccggcgctccatcagatcctt
aaacaggtccagaacaatgagggctttgtgtttgtggccaccatgagacaagacaagggc
tccaggggcaccttacttggagtggagggtcccggagggctccgtcagcttgagatagtg
tccaatggtcgcgccaacacactggatctggtctacatggtaaagggatcccagaacgtg
gtgtccttcgaggatgtggacctgtctgattcgcagtggaagaacatctcgctgtacgtt
catggggaaaacgctcacctgtatgtgggctgcagcctcatagacagcgtgatcctggat
gagcctttctatgagctcctgcgtccagagggcagccagatgtttgtggccaagggatct
atcagggaaaaccacttcaggggcttactgcaaaatgttcagttcctttttgacactcca
atagaaaacatcctgagaaacaaaggctgtgagattgccaaacctgaggaagttaacgtg
gttaatgagagtacagaatctgtgtctgtcggtacatctatatctaccaacttcattggg
gagaaggagaaaatagcatcagacgtgtgcgagcgctcttgtgaagagctcagtaacatg
gtccaggagctcaaaggtcttcgaatcatcgtgggcaatctcatcgatggcttgcagaaa
gtgactgaggagaacaccgtgatgaaggaggtgctgggaaacatgaagaacatcaaagac
aagcgcatgtgctggcaagacggccgtctctttgaggataaagaggactgggttgtggac
agctgcaccaagtgtacctgtcaggaatcaaagattgtgtgccatcaaatcacatgtcca
ccagtagcatgtgccagccccactttcctagatggcgagtgctgtccactgtgtctgcac
cctaaagacagcgaggacggctggtcaccttggtctgaatggacagagtgtacggtcaca
tgtgggacgggcacgcaacaaagaggcaggtcatgtgatgccacaagtaacccctgcagt
ggcccatctatccaaacccgcagatgcagcttgggaaaatgcgacagtcgtgttcgtcaa
gatggtggttggagcttgtggtccccctggtcatcttgctctgtgacgtgtggagaagga
caaatcacacgaattcgccactgcaactctcctgttcctcagctgggaggaaaggactgt
gagggcagtgggagagagacgcaaaagtgtgaagctaaaccctgtccaattgatggagcc
tggggcccctggtctccttgggcagtctgctctgtcacctgtggtggaggaacgaggaca
cgaacacgtgtgtgtaacagccctcgtccacagtatggaggaaagaaatgccctggagat
tccgtagacactaatgcctgtaataaacaggactgtcctgtggatggttgtctgtctaac
ccatgtttcgggggtgttgaatgcacaagctctcctgacggctcgtgggagtgtggtccg
tgccctctcggcttccggggcaatggaaaagtgtgtgaggatgtcaatgagtgtgacatg
gtccccgatctgtgctataaagtgggtgattcccagcgttgtgtcaacacagacccagga
ttccactgcttgccttgtcctcctcgatacaaaggcaatcagccgtttggaatgggagtg
gaggctgccaagctaaataaacaggtgtgtgagcaagaaaacccctgcaaggagaaaacc
cacaactgccacaggtctgctgagtgcatttaccttggccacttcagcgaacccatgttt
aagtgtgagtgtaagatcggttatgctggggatggactcatctgtggcgaggactcagac
cttgatggctggcctaatcagaacctggtgtgtggagccaaccaatcctaccactgcaaa
aaggacaattgtcccaaacttccaaactcaggccaagaggattttgataaagacggtcaa
ggtgacgcctgcgacaaagacgatgataatgatggaatcatggatgagactgacaactgt
cctctactgtataatcccaggcaatttgactatgataaagatcttgtcggtgaccgctgt
gataactgcccatacgagcacaatcctgctcagattgacacagacggtaatggcgaaggg
gacgcctgtgctgttgacattgatggagatgaggttctgaatgagaatgataactgtccc
tacatgtacaacactgaccagaaggacacggatatggatggagtgggtgaccagtgtgac
aactgccctctgctgcacaaccctgagcagactgactcagataatgaccgagttggtgac
gagtgcgacaacaatcaagacattgatgaggacggccaccagaacagcctggataattgt
ccttacattcccaacgccaaccaggccgaccacgacaaagatgggaaaggagacgcttgc
gattccgatgatgataatgacggagtcccagatgataaggacaactgcagactggtgccc
aacaaagaccaacgagactctgatggggatggaagaggcgacgcctgcaaagacgatttt
gacaacgacagcattccagactttatggacgtgtgtcctgagaacgatgccatcagcaac
acagacttccgcaagtttcagatggtgcatttggatcccaaaggaactgcgcaaattgat
cccaactgggtggtcagacatcaaggcaaagagctcgttcagaccgccaactcggaccct
ggcattgcagtgggcttcgacgaattcaacgctgtggatttcagcggcactttttacgtc
aacacagatagagatgatgattatgctggctttgtgttcggctatcagtccagcgggcgc
ttttatgtggtaatgtggaagcagataacgcagacatactgggaggacaatccttcaaaa
gccatcggcatctctggggtttctctgaaagtggtcaactcgaccacaggcacaggagag
caccttcgcaatgccctgtggcacactggggacacacctggacaggttcgcacactgtgg
cacgaccctaagaacatcggctggaaggattacaccgcctacaggtggcacctcattcac
agacccaagactggattcatcagagtggtggtttatgaggggaaacagatcatggcagac
tcaggaccagtttatgatcaaacatttgcaggagggagattaggactcttcgtcttctct
caggaactggtttatttctctgatctcaagtatgaatgtcgagataactga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   ENSEMBL-DRE (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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