KEGG T01004: 114442

Danio rerio (zebrafish): 114442

Entry

114442 CDS T01004

Gene name

ncam1b, ncam3, zPCAM

Definition

neural cell adhesion molecule 1b

Orthology

K06491

neural cell adhesion molecule

Organism

dre Danio rerio (zebrafish)

Pathway

dre04514

Cell adhesion molecules (CAMs)

Class

Environmental Information Processing; Signaling molecules and interaction; Cell adhesion molecules (CAMs) [PATH:dre04514]

SSDB

Motif

Pfam:

I-set Ig_2 Ig_3 ig fn3 V-set C1-set C2-set_2 Shisa HTH_Tnp_Tc5

Other DBs

NCBI-GI:

NCBI-GeneID:

ZFIN:

Ensembl:

Vega:

UniProt:

Position

AA seq 1031 aa
MFPTKAIILVLLFFDNAVSLQVDITPAHGEISVGESRFFLCEVIGGAKEIDWFAPAGEKI
EPGRPDISVIRNDETSSTLTIYNAKVDNAGTYRCVASSGDQDAEATVNLKIYQKITFTNV
PSPQEFTEGDNAIIVCDVISSPPPTVLWKYKGAKIQFDKDVRFKTLSNNHLQIRGIRKTD
EGVYTCEGRIKARGEVDFRSIKVVVNVLPTIRIRQAETNATADMGFSTLLACDPDGFPEP
IVTWRRNNAPLESGNKYSFNEDGSEMTVLDVTKLDEGDYTCIAKNKAGESEQELSLKVFV
QPKITYLESQTTTEMDEQVTLTCEATGDPTPTITWSFGTRVFTEGEQASWTRPEQHKGPD
GEVLVRSDARVSSLTLKYPQYTDAGQYLCTARNAIGETVQPVSLEVRYAPKILGSVAVYT
WEGNPANISCEVLAHPSDVSITWLRDGFQLPNANTSNIKIHNTPSASYLEVNPESQSDFG
NYNCTASNEIGTESREFIMIPADVPSAPSIGEVQPYSSTAQVLFEEPESTGGVPVLKYRA
EWRAVGRGKWVQRVYEVKDGLSSVTVTGLKPETDYEVKMSAINGKGEGDSSPSMVFKTEH
VQGEPSPPILEGTLQPKGNSLKVKWIKQDDGGSPITHYLVRYKAREDSEWKPEIRLPSGS
EYVMLIGLDWDTEYDVFVVAENQQGKSKPGTLTFRTSSEPTATTDSMEDGPGLNTGVIVG
ILILVCVLLLLIVDATCCFLNKCGILMCICGKPGQSTKGKDIETGKAAFVQDVSKEPIVE
VRTEEEATANHDAEGHLEPNETTPLTEPEQVTETAAAVVDLPLSVPTNSDTITDTFDLSQ
SSPVSESTTLTSSITAPPSDPINPVHMTPPDSSTPKTHSRPSISSSDPANVTLLVDLAEV
SPAVPSEEPVQVPSSPTSVDHPGTIISKVTENESVQSPSHAALNPISPQGDIAVPLVNHE
LEIDGELPLASDTDATQDGSHAGGTAGSSGPSAPAQDEKILEDENAELKKVAPDAGFEPN
AVTQTNIESKA

NT seq 3096 nt +upstreamnt +downstreamnt
atgtttccgaccaaggcgataatcttggtgcttcttttctttgacaacgcagtttctctg
caggtcgatattacacctgcgcacggcgagatcagcgtcggagagtctcgcttctttttg
tgtgaagttattggtggggccaaggaaattgattggtttgctccagctggggagaaaatt
gagcctggtcgaccggacatcagtgtgattcgcaacgacgagacgtcctccactcttacc
atctacaacgcaaaggtcgacaatgctggaacatacagatgtgtggccagcagtggcgat
caggatgcagaagccactgtcaatctgaagatataccaaaaaattacctttacaaatgtc
ccatcacctcaagagttcactgaaggggacaacgccattatcgtgtgtgatgtcataagc
tcacctccacccacagtcctctggaaatataaaggtgctaagatccagtttgataaagat
gttcgtttcaagactttgagtaacaaccatctccaaatccgagggatcaggaagactgac
gagggagtgtacacttgtgagggtcgtattaaagcccgtggagaggttgacttccgcagc
attaaagtggttgtgaacgttctacccactataaggatccgtcaagcggaaacgaacgcc
actgccgacatgggtttctcaactcttctggcctgtgatcctgatggattccctgagccc
atagtgacctggagacggaacaatgctccactggagagcggaaacaaatacagcttcaat
gaagacggctcagagatgacagtactagatgtgacaaagctggacgagggagattacaca
tgcattgctaagaacaaagctggggagagcgaacaagaacttagccttaaagtctttgta
caacccaaaatcacatacttggaaagccagacgaccacagaaatggacgagcaggtcaca
ttaacatgcgaagccactggagaccccacacccaccattacatggagcttcggcacccga
gtcttcaccgaaggagagcaggcctcttggactcggcccgaacagcacaagggtcctgat
ggtgaagtgctggtccgcagtgatgcccgagtgtcgtccctcaccctgaagtatcctcaa
tacacagacgccgggcagtatctctgcactgcccgcaatgccattggagaaactgtgcaa
cccgtcagtctggaagtgcgctacgccccgaaaatcctgggctcagtagcggtgtacacg
tgggagggcaacccggccaacatcagctgtgaagtactggctcaccccagcgatgtgtct
attacgtggctgcgagacggcttccagctgcccaacgctaacacctccaatatcaagatc
cacaacacgccttccgccagctacctggaggtcaatccagagtctcagagcgactttggc
aactacaactgtactgcctccaacgagatcgggaccgaatccagagagttcatcatgatc
ccagctgatgtgccctcggcgccgtccatcggtgaagtgcagccgtactccagcacagct
caggtgcttttcgaagagcccgagtccactggaggagttcctgtgctcaagtaccgagcc
gagtggagagccgtgggccgagggaaatgggtgcagcgagtctatgaggtgaaagacgga
ctgagttcagtcacagtcactggccttaaacccgaaaccgattacgaagtcaagatgtct
gctatcaacggcaagggcgaaggcgacagcagcccgtcaatggtcttcaaaaccgagcat
gttcaaggagagcccagtcctcctattctagaagggactctacaacccaaaggcaattct
ctcaaagtcaagtggatcaaacaagatgacggagggtcaccaatcacccattacctggtc
agatacaaagctagggaagactccgagtggaaacctgagatccgtctgcccagtgggagt
gagtacgtaatgctgatcggtctggactgggacaccgagtatgacgtgtttgtggtggca
gagaaccaacagggcaagtccaagcctggcaccctgaccttcaggacctcatcagagccc
acagccaccacagactcaatggaggacgggccgggcctgaacactggtgttattgttggt
attcttatcctggtgtgtgtgctgctcttgctgatcgtggacgccacctgctgcttcctt
aacaagtgtggcatcctcatgtgcatctgcggtaaacccgggcaaagcaccaaaggcaag
gacatagagaccggcaaagctgcctttgttcaagacgtgtcgaaagagcccattgtggaa
gtgaggactgaagaagaggccacagctaatcatgacgcagaaggacatcttgagcccaat
gagaccacgccactgactgaaccagagcaagtgacggaaactgccgccgcggtggtggac
ttgcctctttccgtgcccactaactcagacacaatcactgacacttttgaccttagccag
agcagcccggttagcgaaagcacgaccctcacctccagcatcacagcacctccctctgac
cctattaaccccgtccacatgacaccccctgacagcagcacacccaaaacccacagcaga
ccttccatctcatcctccgacccggctaatgttactctcctggtagatctggcggaggtt
tctccagccgtcccatcagaagaaccagtccaagttccttcttcccctaccagtgtagat
catcctggtactataatctcaaaagtcaccgaaaacgagtctgttcagagtccatctcat
gccgctttaaatcccatcagcccacagggcgacatcgctgtcccattagtgaatcatgaa
cttgagattgatggagagctcccactggcttcagacacagacgccacgcaggatgggtca
catgctgggggtacagctggctccagtggcccatctgctccagcacaggacgagaaaatt
ctggaggatgaaaatgcagagctgaagaaagtggcacccgatgcaggatttgaacccaac
gccgtcacgcaaacaaacattgaaagtaaagcatga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (6)   
   UniGene (1)   
   ENSEMBL-DRE (1)   
   OC (1)   
   VEGA (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (10)   
   Pfam (10)   
All databases (38)   

Download RDF

DBGET integrated database retrieval system