KEGG T01004: 30324

Danio rerio (zebrafish): 30324

Entry

30324 CDS T01004

Gene name

tpma, TPM1, fb37a09, tm, wu:fb37a09

Definition

alpha-tropomyosin

Orthology

K10373

tropomyosin 1

Organism

dre Danio rerio (zebrafish)

Pathway

dre04260

Cardiac muscle contraction

Class

Organismal Systems; Circulatory system; Cardiac muscle contraction [PATH:dre04260]

SSDB

Motif

Pfam:

Tropomyosin Tropomyosin_1 Laminin_II IncA TMF_DNA_bd Myosin_tail_1 MscS_porin Flagellin_N ATG16 Tho2 SlyX Sugarporin_N Laminin_I CENP-F_leu_zip AAA_13 ADIP DUF869

Other DBs

NCBI-GI:

NCBI-GeneID:

ZFIN:

Ensembl:

UniProt:

Position

AA seq 284 aa
MDAIKKKMQMLKLDKENALDRAEQAETDKKAAEERSKQLEDDLVALQKKLKATEDELDKY
SEALKDAQEKLELAEKKATDAEGDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIVEGELERTE
ERAELNEGKCSELEEELKTVTNNMKSLEAQAEKYSAKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI

NT seq 855 nt +upstreamnt +downstreamnt
atggatgccattaagaagaagatgcagatgctcaagctcgacaaggagaacgccttggac
agagcagagcaggctgagaccgacaagaaagcagctgaggagaggagcaagcagctcgag
gatgacctggtcgccctgcagaagaagctgaaggcaaccgaggatgagttggacaaatac
tccgaggccctgaaggatgcacaggagaaactggaactggctgagaagaaagctaccgat
gctgagggcgacgtcgcttccctgaacagacgcatccagctggttgaggaggagttggat
cgcgctcaggagcgtctggccactgctctgcagaagctggaggaggccgagaaggctgct
gatgagagtgagagaggcatgaaggtcattgagaacagggccctgaaggatgaggagaag
atggagctgcaggagatccagttgaaggaggccaagcacattgctgaggaggctgatcgc
aagtatgaggaggtggcccgtaagctggtgattgttgagggtgagctggagcgtactgag
gagcgcgctgagctcaatgagggtaagtgctctgagctggaggaggagttgaaaactgtg
accaacaacatgaagtctctggaggcccaggctgagaagtactcagctaaggaggacaaa
tatgaggaggagatcaaggtcttgactgacaagctgaaggaggctgagactcgtgctgag
ttcgctgagagatcagtcgccaagcttgagaagaccattgatgatctggaggatgaattg
tatgcccagaaactcaagtacaaagccatcagcgaggagctggaccacgctctcaacgac
atgacctccatttaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (4)   
   UniGene (1)   
   ENSEMBL-DRE (1)   
   OC (1)   
   PROTHERM (28)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (17)   
   Pfam (17)   
All databases (66)   

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