KEGG   Danio rerio (zebrafish): 30769
Entry
30769             CDS       T01004                                 
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform 3 precursor
  KO
K06753  roundabout, axon guidance receptor 1
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:dre04515]
    30769 (robo1)
Cell adhesion molecules [BR:dre04515]
 Immunoglobulin superfamily
  ROBO family
   30769 (robo1)
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 fn3 V-set C2-set_2 Pur_ac_phosph_N Ig_5 Ig_C17orf99 Ig_4 VID27_N
Other DBs
NCBI-GeneID: 30769
NCBI-ProteinID: NP_001296753
ZFIN: ZDB-GENE-000209-3
Ensembl: ENSDARG00000026784
UniProt: A0A8M1P7C2
Position
15:complement(39277653..39819928)
AA seq 1646 aa
MTGRIIGFVLFIAVTHVCTGSRLRQEDYAPRIVEHPSDLIVSKGEPATLNCKAEGRPTPT
VEWYKDGERVETDRDNPRSHRMLLPTGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVS
HNASLEVAILRDDFRQNPVDVMVAAGEPAVMECQPPRGHPEPTISWKKDGVNIDDRDERI
TIRGGKLMITNTRKTDAGKYVCVGTNMMGERESEIAELTVLERPSFLRKPSSQSVLVDQS
VEFRCEAQGDPVPTIRWRKEDGELPKGRYEIWEDHTLKLKRLTSGDAGTYTCQAENMMGK
TEASATLTVHVPPVFVVRPRNQVAGMGRTVTFQCEATGSPQPAIFWQKEGSQNLLFSSQP
PPPSSRFSVSQTGDLTITAVERSDGGYYSCQALNIAGSVITKALLEVTDVISDRPPPIVR
QGPTNQTVAVDGTVVLSCQATGTPIPTILWRKDGVLVSTHDSRLKQLDTGALQIRYAKLG
DTGMYTCTASTPSGEASWKAYLEVQEFGAPVQPGRPTDPNLIPSAPSKPDVTDVSRTSVS
LSWKPNLNAGATPTSYVIEAFSHAAGSSWQTLADHVKTESFVLKGLKPSAVYLFLVRAAN
AYGLSDPSPISDAVKTQDVPPTSQGVEHGQIQRELGDVVIHLHNPTILSSSSVRVQWTVE
QQSQYIQGYKVMYRPSPEGAPQRVDWAMFEVGAPGEHSAVVTQLKKGITYEFKVRPFFNE
FQGTDSDIKVGKTLEEAPSAAPRGVTVTGSGDNGTAVLVAWQPPPEEEQNGVVQEYKIWC
LGNESRYHINRTVDGSTHSVLIPGLVAGVTYRLEVAAGTGAGPGVKSDPTSFQLDSSGRV
LPPPLDDDNTISQQISDVVRQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGI
RKVPSFTFTPTVAYQRGGEAVSSAGRPGLLNIGEPATQPWLADTWPNSCSNHNDCTINCC
TGSNGNSDSNLATYSRPADCIANYSNQMDNKATNLLAPDTGLYSDVDLSNKINEMKTFNS
PNLKDGRFMGPGGQPTPYATTQLIQSSLANNNMNSSSGGSGGGSADFNEKQSWKSSQGTP
QKQADINTPLQYNVMEQNKLNKDHYRGEGPISVTIPYNQAQDVLTGETYSSSDRGSSTSG
SQGQKKGGRTTKQAKQNPMNWTELLPPPPVNPPPCQEYTLVMDDSYDTDLQCPLPPSRMY
LQPDELEEEEDEVELERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEEMHPMLQDNPD
LHERRRLLVSPPPPPRPLSPPHTYGYISSPLGLDTDGLEEEDDDEEEGDETDAEVARVHQ
HHMMHPHQQHLPQQRALLRGLEQTPASSTCDLESSVTGSMINGWGSASEEDNASSGRSSA
VSSSDGSFFTDADFAQAVAAAAEYAGLRVAKHPGKGHHQLPVSGARKYQNLPAGHRPGSP
VSTDSNVSAAPGQRRPLKRQKQHPAAQTGYQRREAYTEDLPPPPIPPPAMLKSPTHPAKT
IPEGPRGAMSPRSSSADGKDRRTGAGGPRVRDGSDTRTSSSERRDGQDVQRGQRTGKNSK
QDEAVKSRQHPGSEDILPYSRPSFPAVHSPRGERDPSSSSSLSSRGSGGRRRGEGPPGAR
RNPADIGLNTIGAFQTGGDELEMVES
NT seq 4941 nt   +upstreamnt  +downstreamnt
atgacggggagaataattggattcgtgctttttatcgcagttacacacgtttgcacagga
tcccgtctgcggcaggaagattacgcaccccgtattgttgaacacccctctgatctgatc
gtatccaaaggcgaaccggccaccctaaactgcaaggctgaaggacgtcccacgcccaca
gtggagtggtacaaagatggagaacgagttgaaaccgaccgggacaatcctcgatcccac
cgcatgctcctgcccaccggatctctcttctttctccgcattgttcacggccggcgcagc
aaacccgacgaaggctcctacgtttgtgtggcacgtaactatctgggagaagccgtcagc
cacaacgcctcgctggaagtagctattctccgagatgatttccgacagaaccctgtggac
gtgatggtggcagcgggggagccagctgtaatggagtgccagccgccccgaggacaccca
gagcccaccatctcctggaagaaagatggggtcaatatagacgacagagacgagaggata
acgatacgaggaggaaagctcatgatcaccaacaccagaaaaacggacgcggggaagtac
gtgtgcgtgggaaccaacatgatgggggaacgagagagcgagatcgcggagttgactgtt
ctcgagaggcccagtttcttgcgaaagccgagcagccagtccgtccttgtggatcagagc
gttgagttcagatgtgaagctcaaggagaccccgtgcccaccatccgatggaggaaagag
gacggagaactgcccaagggaaggtatgagatctgggaggaccacactctcaaactgaag
aggctgacttcaggagacgccggtacttacacctgtcaggcggagaacatgatgggcaag
acggaggccagcgccaccctcaccgtccacgttcctccagtgtttgtggtccgacccagg
aatcaggtggcgggtatgggccgcaccgtcacctttcagtgtgaagccacaggaagtcct
cagcctgcaatattctggcagaaagaaggcagtcagaatctcctgttctcgtctcagcct
cctcctccgtccagcagattctctgtgtctcagactggagatctgaccatcacagcagtt
gagcgttcagatggaggatattatagctgtcaggctctcaacatcgctggcagtgtgatc
accaaagccctgctggaggttacagacgtgatttcagacaggcctccaccaatcgtccgt
cagggtccaaccaaccagactgtggcagtggacgggacggtggttctgagctgccaagcc
accgggacaccgattcctaccatcttatggaggaaagatggagttctggtgtccacacat
gattcccgactcaagcagctggacactggagccctgcagattcgatacgcaaagctgggc
gacactggcatgtacacctgcacggcttccaccccgagcggagaggcgtcctggaaggcc
tacctggaggtgcaagagtttggtgctccagttcaaccgggccgtcccacagatcccaac
ctcatccccagcgccccatctaaaccagacgtcacggatgtcagccgcacctccgtgtct
ctttcctggaagccgaatctgaacgctggagccacacccacctcatacgtcattgaggcc
ttcagccatgcagcaggcagcagctggcagacgctcgccgatcatgtgaagacggaaagc
ttcgtgcttaagggtctgaagccaagtgccgtctacctgtttctggtgagagcggccaat
gcgtacggcctgagcgaccccagtcccatcagcgacgctgtcaaaacacaagacgtccca
ccaaccagccagggagtggagcatggccagatccagagagaactgggagatgtcgtcatt
caccttcacaatcccacaattctctcatcgtcttccgtcagagtccagtggactgtggag
cagcagtctcagtatattcagggctataaggtgatgtaccgtccgtctccagaaggcgct
ccgcagcgagtggattgggccatgtttgaggtcggagccccgggggagcacagcgctgtc
gtcacccagctcaagaagggcatcacctatgagttcaaagtgcgccctttcttcaatgag
ttccagggcaccgacagcgacatcaaagtgggaaagaccctggaggaggctcccagcgct
gctcccagaggcgtcaccgtaacaggaagtggagacaacggcacagcagtcctggtcgcc
tggcaaccgccgccagaggaggagcagaacggcgttgtgcaggagtacaagatctggtgt
cttggtaatgaaagccgataccacatcaaccgcacagtggatggttctacacactcggtg
ttgattcctggtctggtggcaggagtcacatacaggctagaggtggcagcaggcactggg
gccggacccggggtcaagagcgaccctacgtccttccagcttgactcttctggccgtgtt
ctcccgccgccgctggacgacgataacaccatttcccagcagatctcagacgtggtgcgt
cagccggctttcatcgcgggcatcggcgccgcctgctggatcatcctgatggtgttcagc
atctggctataccgccaccgcaagaagaggaacggcctcagcagcagctacgccggcatc
cgcaaagtgccctccttcaccttcacccccacagtggcctatcagagaggcggagaggcc
gtcagcagtgcaggaaggccgggtttgttgaatataggtgaaccagctacacagccctgg
cttgcggacacctggcccaacagctgctccaatcacaatgactgcactattaactgctgc
accggcagcaatggaaacagcgacagcaacctggcaacttacagccgcccagccgactgc
atcgccaactacagcaaccagatggacaacaaggccaccaacctgctggctccagatact
gggctttacagcgacgttgacctttcaaacaagatcaacgagatgaagaccttcaacagc
cccaacctgaaggacgggcgttttatggggcctggtggtcaacccacaccctacgccacc
actcagctcattcaatccagcctggccaacaacaacatgaacagcagcagtggcggaagc
ggaggaggaagcgctgactttaatgagaagcagagctggaagagcagccagggaacacct
cagaaacaggccgacatcaacacaccactgcagtataacgtcatggaacaaaacaaactc
aacaaggaccactaccgaggtgagggtcccatctcagtcaccatcccttataaccaggcc
caggacgtcctcacaggagaaacctacagcagctcggacagagggagcagcacctctgga
agtcaagggcagaaaaagggtggacgaacaactaaacaagccaaacagaatccaatgaat
tggactgaactgttgcctcctcctccggttaatccgccgccatgtcaagaatacaccctg
gtgatggacgacagttacgacacagacctgcagtgccctttgccgccgtctcggatgtat
ctgcaacctgacgagttggaagaggaggaggacgaggtggagctggagcgtggacctaca
cctcctgtacggggagctgcttcttcacctgctgccgtgtcctacagccaccagtccacc
gcaaccctaaccccgtcccctcaggaggagatgcatcccatgctgcaggacaaccctgat
ctacatgagcgcaggagactgttagtgagtccacctcctccaccacgacctctctctcct
ccacacacatacggctacatctccagtcccctcggcctggacacggacggcctagaggaa
gaggatgatgatgaagaagagggtgacgaaacggacgcagaggtagctcgagtccaccag
caccacatgatgcaccctcaccagcagcacttgccccagcagagggctctcctgcggggt
ctggaacaaaccccggcctccagcacctgtgacctggagagctctgtgactgggtctatg
attaacggatggggttcggcttcagaagaggacaacgcctcgtcaggccgttccagtgca
gtcagctcatcggatggatcgttctttaccgatgccgatttcgcccaggctgtggcagct
gcggctgaatatgctggtcttcgagtggcaaagcatcctgggaaaggacatcatcagctt
ccagtgtctggagcacggaaataccaaaacctccctgcgggacaccgtccaggcagccca
gtgtccacagacagtaacgttagcgcagccccgggtcagaggaggcccctgaagaggcaa
aaacaacatccagctgctcagacaggctaccagcgccgagaggcctacacagaggatctc
ccccctcctccgattcctcctccagccatgctgaagtctccaacacacccggccaaaacc
atccccgagggtccacggggggccatgtcgccaagatccagctctgcggatggcaaggac
aggcgaacgggtgctggcgggcccagggtcagggacggttcagacactcggaccagctct
tcagagcggagggatggccaagatgtacagaggggtcagagaacgggcaagaatagcaaa
caagatgaagccgtgaagagccgccagcacccaggctcagaggacatcctaccttacagt
cgtccttctttcccagccgtccacagtcctcgaggagaacgggaccccagttcctccagt
tcactgtcctctcgggggtctggcgggcgacggagaggtgaagggccaccaggggcccgc
agaaaccctgcagacattgggctaaacaccataggagccttccagactggaggggacgag
cttgagatggtggagagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (14)   
   UniProt (1)   
   RefSeq(pep) (13)   
DNA sequence (26)   
   RefSeq(nuc) (14)   
   GenBank (6)   
   EMBL (6)   
Protein domain (12)   
   Pfam (12)   
All databases (98)   

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