KEGG   Danio rerio (zebrafish): 322007Help
Entry
322007            CDS       T01004                                 

Gene name
usp1, wu:fb43a02, zgc:55962
Definition
ubiquitin specific peptidase 1 (EC:3.4.19.12)
Orthology
K11832  
ubiquitin carboxyl-terminal hydrolase 1 [EC:3.1.2.15]
Organism
dre  Danio rerio (zebrafish)
Pathway
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:dre00001]
 Genetic Information Processing
  Replication and repair
   03460 Fanconi anemia pathway
    322007 (usp1)
Enzymes [BR:dre01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.2  Thioester hydrolases
    3.1.2.15  ubiquitin thiolesterase
     322007 (usp1)
Peptidases [BR:dre01002]
 Cysteine Peptidases
  Family C19: ubiquitin-specific protease family
   322007 (usp1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
ZFIN: 
Ensembl: 
Vega: 
UniProt: 
Position
6
AA seq 772 aa AA seqDB search
MPGLHSESGVVAAAGSPVKKSKLSLKFFQKKETKRALDFSEAPPEDNSNVTTEPQETICH
DQVVPLPCPSSPLTCEKRESLVPFVGLNNLGNTCYLNSILQVLYYCPGFKEAIKSLCHVA
KLKDKPQEEGVNNEGDSGENTLPVPMELLGSFHSLISSVEQLQSSFLLNPEKYNDGELAT
PPRKLLNALRQLNPMYEGYLQHDAQEVLQCILVNIQEACDTIKKEQTDNQDTTMINGTES
VQDGEGSSDSQLSGKRKSDTEAGNAKKKPKSQSKSKKNEENVPMTRSKRKSSSEISTENS
ATEQRNGTEEQEKDSTTEEEKNDSPPKDTGKRTRRGKLGWLRPSGKQPSIFSKFRSMGRI
TSHVGAKGETKEKSDCSSQEKQDKDNSENENKTHEVKQDLGKNEEQSGLDVLKWMFQGQL
VLRTRCLECECFTERREDFQDISVPVQEDETLSSDSSSEISPDPKTELKTLKWAISQFAS
VERIVGQDKYFCETCHHYTEAERSLLFDKTPEVITIHLKCFAANGSEMDPYAGLSKVNTP
LQTPLKLSLHEWCTQPDSPDYELFAVVMHSGVTISSGHYTTYIRMMDLHHTNIKPQTQDE
EHDRDQEEDMKQKKEETSQTDYDDGEVSFSLSGRGRNVARTSGTNNMSSKTAGKRCSEGV
GLLGGQRSITSYELSNSKQNNPDKPSSLSSRALLQNAVKKEPEEDCADAVADGTQVSFDL
ALRNLLDFEGKWMLFDDSEVRLYEEEDFLRACSPETCSTSTPYLLFYKRVSQ
NT seq 2319 nt NT seq  +upstreamnt  +downstreamnt
atgcccgggctgcacagtgaaagtggagtggtggctgcagctggcagtcctgtgaagaaa
agcaaactctcattgaagttctttcagaagaaggaaaccaaacgcgctctggacttctca
gaggccccgccagaagacaacagtaacgttaccactgagccgcaagagactatttgtcat
gaccaggttgtgccattgccctgcccttcgtctcctcttacctgcgagaagcgcgagagc
ctggtccccttcgttgggcttaataatttggggaacacctgctacttgaatagcatcctt
caggttctatattactgtcctggttttaaagaagccatcaagtccttgtgtcatgtggct
aaactgaaagacaaaccgcaagaagagggtgtcaacaatgagggggactctggtgagaac
accctacctgttcccatggagctgttgggcagtttccacagcctcatttcctctgtggag
cagctgcagtccagcttcctgcttaacccagaaaaatacaatgatggagagctagccaca
ccacctcgtaaactgcttaatgcgctcaggcagctcaacccaatgtatgagggttacttg
cagcatgacgcacaagaggtcctgcagtgcattcttgtgaacattcaggaggcctgtgac
actatcaaaaaagagcaaacggacaaccaggacaccacaatgatcaatggaaccgagtct
gtccaggatggtgaagggagctctgacagccagctgagtggaaagagaaagagtgacaca
gaagcaggcaatgctaagaagaaaccaaaatctcaaagcaagtctaagaaaaatgaagaa
aacgtgcctatgacccgctcgaaacgcaagtcctccagtgaaataagcacagagaattca
gctactgagcagaggaatggcacagaagagcaagagaaggatagcaccacagaagaagag
aagaatgacagtccacctaaagatacaggcaagaggactaggagagggaagctgggctgg
ttgaggccatcagggaagcagcctagcatcttctccaagtttcgcagcatgggacgaatt
acttcacatgtaggagcaaaaggagagaccaaggagaagtcagattgtagttctcaggag
aaacaggacaaggacaactctgagaatgaaaacaaaactcatgaagttaaacaggatctg
ggaaagaatgaagagcaatcaggcctggatgtgctgaagtggatgtttcagggtcagctg
gtgttgcggacacgttgtctggaatgtgagtgtttcacagagagaagagaggattttcaa
gacatcagtgtgcctgtgcaagaagacgaaaccctctcttctgactctagttctgagatt
tctccagatcccaagactgagctgaaaactctaaagtgggccatatctcagtttgcatct
gttgagcgtattgtgggccaagataaatatttctgtgagacctgtcatcactacacagaa
gctgagagaagtctcctgtttgacaaaacgccagaagtcatcacaatccatctaaagtgc
tttgctgccaatggctcagagatggacccttatgctggcctttctaaggtgaacactcct
ctgcagactcctctgaaactttccctgcatgagtggtgcactcagcctgactctccagac
tatgagctcttcgccgtggtcatgcatagtggagtgaccatcagcagcggtcactacacc
acctacatccgcatgatggatctccatcacaccaacatcaagcctcagactcaggatgaa
gagcatgaccgagaccaagaagaagacatgaaacagaagaaagaggaaacttctcaaacc
gactatgatgatggcgaggtgtccttcagcttgtctggcagagggcgaaatgtggccaga
accagcggaactaataacatgtccagcaaaacggcaggcaagaggtgctctgaaggtgtt
ggccttttaggaggacaaaggagcatcaccagctatgaactcagcaacagcaagcaaaac
aatccagacaagccatccagcttgtccagtcgtgctctccttcagaacgctgtaaagaaa
gagccagaggaagactgcgctgatgctgtggcagacgggacacaggtcagttttgacctc
gctctcagaaatcttctggactttgaaggaaagtggatgctgtttgatgactctgaagtt
agactctatgaagaagaggacttcctccgtgcttgttctccagagacgtgctccacctct
acaccatacctgctcttctacaagagagtctctcagtaa

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