KEGG   Danio rerio (zebrafish): 336099
Entry
336099            CDS       T01004                                 
Symbol
trim9
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM9
  KO
K10649  tripartite motif-containing protein 9/67
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    336099 (trim9)
   04121 Ubiquitin system [BR:dre04121]
    336099 (trim9)
Membrane trafficking [BR:dre04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    336099 (trim9)
Ubiquitin system [BR:dre04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    336099 (trim9)
SSDB
Motif
Pfam: SPRY zf-B_box fn3 zf-C3HC4_4 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4 PRY zf-RING_5 zf-RING_2
Other DBs
NCBI-GeneID: 336099
NCBI-ProteinID: NP_991126
ZFIN: ZDB-GENE-030131-8043
Ensembl: ENSDARG00000039123
UniProt: Q6NZX0
Position
13:complement(36868365..36911704)
AA seq 699 aa
MDEMEEELKCPVCGSFFREPIILPCSHNICLACARNILVQTPDAESPQSSRASGSGVSDY
DYLDLDKMSLYSEADSGYGSYGGFVSAPTTPCQKSPNGVRVFPPSMPPPQQAQHHLLPHT
GVLPPVPRNSCLTCPQCHRSLTLDDRGLRGFPKNRVLEGVVDRYQQSKAAALKCQLCEKS
PREATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRISRRASPRKISTCTEHEL
ENLSMYCVQCKTPVCYQCLEDGKHSTHEVKALGAMWKLHKGQLSQALNVLSDRATEAKEF
LVQLRNMVQHIQENGVEFEACLVAQCDALIEALNRRKAQLLSRVTKEHEHKLSVVRDQIS
HCTVKLRQTTGLMEYCLEVIKENDPSSFLQISDALIRRVHMTENQWGKGSLTPRMSSDFD
LTLDSGPLLQTIHQLDFVQMKVPAAPILQLEECCTQTSSATLSWKQPPLSTIAVDGYILE
LDDGTGGQFREVYVGTEMICTVDGLHFNSTYKSRVKAFNSSGVGQYSKTLVMQTSEIAWF
TFDSASAHPDIILSNDNLTVTCNSYDDRVVMGNTGFSRGVHYWEMTIDRYDNHPDPAFGV
ARADVMKDVMLGKDDKAWAITDGGISKGATVGVLLDFTRGILLFLINDEQQGPVAFNTLE
GMYYPAISLNRNVQVTLHSGLPIPDFYTPGESEAAGSVC
NT seq 2100 nt   +upstreamnt  +downstreamnt
atggatgaaatggaagaggagttaaaatgcccggtgtgcggctcatttttccgcgagccg
atcatcctgccctgctcgcataatatttgcctggcctgcgcgagaaacatcctggtacag
acgcccgacgccgaatccccgcaaagcagccgcgcgtccggctccggggtctccgattat
gattacttagacctggataagatgagtctgtacagcgaggcggacagcggatacggctct
tacggcgggttcgtgagcgcaccgaccaccccttgccagaagtcccccaacggcgtgcgt
gttttccctccttcaatgcctcctccacagcaggcgcaacaccacctgctgcctcacacc
ggcgtcctgccgccagtcccacggaactcctgcctcacctgcccgcagtgccaccgcagc
ctgacgctggatgacagggggctccgggggttccccaagaaccgcgttttggagggggtg
gtggaccggtatcagcagagcaaagccgccgcgctcaagtgtcaactgtgcgaaaagagc
ccccgcgaggcgactgtcatgtgcgagcagtgcgacgtgttttattgcgacccctgccgc
ctccggtgccaccctccccgaggcccgttggccaagcaccggctcgtgccgccggcgcaa
ggcagaatcagccgccgcgcgagcccgcggaaaatctccacctgcaccgagcacgagctg
gaaaacctgagtatgtactgtgtccaatgtaagacccccgtgtgctaccagtgtctggag
gacggcaaacactccacccatgaggtcaaagcgctgggagccatgtggaagctccacaag
ggacaactctctcaagcactgaatgttctgtctgatcgggccacagaggctaaagagttc
ctggtgcagctcagaaatatggtccaacacatacaggagaacggagttgaatttgaggcg
tgtttggtggcccagtgtgatgctctgattgaagctctgaaccgcaggaaagcacagctt
ctcagcagagtaaccaaagaacatgaacacaaactctcggtggttcgtgatcagatctcg
cactgcacggtgaagttgaggcagaccacaggactaatggagtactgtctggaggttatc
aaagagaacgatcccagcagcttcctgcagatctcggatgctctgatcagacgggtccat
atgacggagaatcagtgggggaaaggctctctgaccccccgcatgagcagtgactttgac
ctgacgctggacagcgggcctctgctgcagaccatacaccagctagactttgtgcagatg
aaggttccagctgctcctattcttcagttagaggagtgctgcactcaaaccagcagcgcc
actctgtcctggaaacagccgcccctctccaccatcgctgtggacgggtatattctagag
ctggatgatggcactggaggccagttcagagaagtgtacgttgggactgagatgatctgc
actgtggacggtctgcacttcaacagtacttacaaatctcgtgttaaagcatttaactcc
agcggagtcggccagtacagcaaaacgcttgtcatgcagacgtcagagatagcctggttc
acctttgactccgcatcggctcatcctgacatcatcttgtccaatgacaacctcacggtg
acgtgtaacagctacgacgaccgcgtggtcatgggaaacactggcttttctcgtggcgtg
cattactgggagatgaccatcgatcgctatgataaccaccctgacccagcgtttggcgtc
gcccgggccgatgtgatgaaggatgtgatgctgggcaaggatgataaagcatgggccata
actgatggagggataagtaaaggagctacggtgggtgttttgctggatttcacccgtggg
attctcttgtttttgataaatgatgagcaacagggacccgttgccttcaatacactggag
ggcatgtactacccagccatcagcctcaaccgcaatgttcaggtgactcttcattctggg
ctgcctattcctgatttttatacacccggcgagtctgaagctgcaggctcagtctgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (10)   
   Pfam (10)   
All databases (45)   

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