KEGG   Danio rerio (zebrafish): 393417Help
Entry
393417            CDS       T01004                                 

Gene name
capn1a, capn1, zgc:63788
Definition
calpain 1, (mu/I) large subunit a
Orthology
K01367  
calpain-1 [EC:3.4.22.52]
Organism
dre  Danio rerio (zebrafish)
Pathway
Protein processing in endoplasmic reticulum
Apoptosis
Brite
KEGG Orthology (KO) [BR:dre00001]
 Genetic Information Processing
  Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    393417 (capn1a)
 Cellular Processes
  Cell growth and death
   04210 Apoptosis
    393417 (capn1a)
Enzymes [BR:dre01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     393417 (capn1a)
Peptidases [BR:dre01002]
 Cysteine Peptidases
  Family C2: calpain family
   393417 (capn1a)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
ZFIN: 
Ensembl: 
Vega: 
UniProt: 
Position
13
AA seq 704 aa AA seqDB search
MFSYGGISAHISANRLKADGAGSFEQALHFQNQDYEALRQECLEGGYLFEDPCFPAEPPS
LGFKELAPHSSKTRDVEWMRPTELCDDPQFIVGGATRTDICQGALGDCWLLAAIGSLTLN
ERLLHRVVPHGQSFQDDYAGIFHFQFWQFGEWVDIVIDDRLPVKDGELMFVHSAEGNEFW
SALVEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELRKAPRDLYRIISKALDRGSL
LGCSIDITSAFDMESVTFKKLVKGHAYSVTALKQVEYRGRMERLIRIRNPWGQVEWTGAW
SDNSPEWDEIDPSEKDDLHLQMEDGEFWMSFGEFLRQFSRLEICNLTPDALSDDDMSHWN
TIKFHGAWRRGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDEEVACSFLVALMQKDRR
RYRGQGQDMHTIGFAIYEVPEEYTGCQNVHLKKDFFLSNSSAARSETFINLREVSTRLRL
PPGEYIIVPSTFEPSKEADFVLRVFTEKQSETEELDDEISADLEDEEEITEDDIDDSFKS
LFAQLAGEDMEISVHELKTILNRVVSKHKDVKTDGFSMDSCRTMVNLLDKDGSARLGLVE
FQILWNKIRKLLGIFREFDIDKSGTMSSYEMRLAVESAGFKLNNRLNQILVARYAENEAI
DFDNFVCCLIKLEAMFRSFQQLDREETGTAEMNLSEWLFMTMCG
NT seq 2115 nt NT seq  +upstreamnt  +downstreamnt
atgttctcatacggcgggatctcagcacacatcagcgctaacagactgaaggcggatggc
gcaggttcttttgagcaggctttacacttccagaaccaggactacgaggccctcagacag
gagtgtttagagggaggctacctgtttgaagacccctgtttcccagccgaaccgccctct
ctgggcttcaaagagctcgccccgcactcctccaaaacccgagatgtggagtggatgcgc
cctacggagctctgtgatgatcctcagttcattgttggaggagccacacgcacagacatc
tgtcaaggagctctgggtgactgctggctcctcgctgcgattggctcgctgactcttaat
gaaagactccttcacagggttgtccctcatggccagagctttcaagatgactatgctgga
attttccactttcagttctggcagttcggtgaatgggtggacattgtgatcgatgatcgg
ctcccggtcaaagacggagagctcatgtttgtccattcagcagagggaaatgagttctgg
agtgccttggtggaaaaagcctatgctaagctaaatggctcttatgaagctctttctgga
ggctctaccactgagggttttgaggattttactggaggcgtttcagagatgtacgagctc
cggaaagctcccagagacttgtaccgaatcatcagcaaagccctggacagaggctcactg
ctgggctgctctattgatatcaccagtgcctttgacatggagtctgtgacatttaagaag
ctggtaaagggtcacgcttactccgtgactgctctcaaacaggtggagtacagggggcgg
atggagaggcttatccgcatccgtaatccatggggtcaggtagaatggaccggagcctgg
agtgataactctcctgaatgggatgagattgatccatcagagaaggacgacttgcactta
caaatggaggatggagagttttggatgtcatttggtgagtttttacgtcagttctcccgg
ctggagatttgcaatctgacccctgatgctctgagtgacgatgatatgagccactggaac
accatcaagtttcatggagcctggaggagaggaagcactgcaggaggatgccgaaatcat
cccaacacgttctggatcaatccacagtataagattacactgctggaggaagatgatgat
ccggaggatgaagaagtggcctgcagcttcctggtggctttaatgcagaaagaccgcaga
cggtaccgcggccaaggacaagatatgcacactatcgggtttgcaatttatgaggttcct
gaagagtacacaggctgtcagaacgtgcaccttaagaaggatttcttcttgagcaactca
tcagctgctcgatccgagaccttcatcaacctgcgggaggtgagcactcgcctgcgtctg
cctcctggagaatacatcatcgtcccctccaccttcgagcccagcaaagaggccgatttt
gtcctgagagtcttcacggagaaacagtccgagaccgaggaattggatgacgagatttca
gctgacctggaggatgaggaagaaattacagaagatgacattgatgactcctttaagtcc
ctgtttgcccagctggctggagaggatatggagatatctgttcatgaactcaagactatt
ctcaacagagtagtctccaaacacaaagatgtgaagacagacggcttcagcatggactcc
tgcagaacgatggtcaacctcctggataaagatgggagcgcacgtttgggcttagtagag
tttcagatcctctggaacaaaataaggaagttgctggggatcttcagagagtttgatatt
gataagtcaggaactatgagctcttatgagatgcgtctcgctgtagaatcagcaggcttt
aaactcaataacagactcaaccagatcctggtagccagatatgcagagaacgaggccatt
gattttgataacttcgtctgctgcttgatcaaactagaggccatgttcagatcttttcaa
cagctggacagagaagaaacaggaacggctgagatgaacctttctgagtggctcttcatg
accatgtgtggttga

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