KEGG T01004: 436617

Danio rerio (zebrafish): 436617

Entry

436617 CDS T01004

Gene name

rxrgb, zgc:92183

Definition

retinoid X receptor, gamma b

Orthology

K08526

retinoid X receptor gamma

Organism

dre Danio rerio (zebrafish)

Pathway

dre03320	PPAR signaling pathway
dre04920	Adipocytokine signaling pathway

Class

Organismal Systems; Endocrine system; Adipocytokine signaling pathway [PATH:dre04920]
Organismal Systems; Endocrine system; PPAR signaling pathway [PATH:dre03320]

SSDB

Motif

Pfam:

Hormone_recep zf-C4 Nuc_recep-AF1

Other DBs

NCBI-GI:

NCBI-GeneID:

ZFIN:

Ensembl:

UniProt:

Position

AA seq 452 aa
MDTHDTYLHLHSSPLNSSPSQPPVMSSMVGHPSVISSSRPLPSPMSTLGSSMNGLPSPYS
VITPSLSSPSISLPSTPSMGFNTLNSPQMNSLSMNGNEDIKPPPGLAPLGNMSSYQCTSP
GSLSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDIKECLIDKRQRNRC
QYCRYQKCLAMGMKREAVQEERQRGKEKSDTEVETTSRFNEDMPVDKILDAELSVEPKTE
TYTESSPSNSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLI
ASFSHRSITVKDGILLGTGLHVHRSSAHSAGVGSIFNRVLTELVSKMKDMQMDKTELGCL
RAIVLFNPDAKGLSNSLEVEALREKVYASLETYTKQKYPDQPGRFAKLLLRLPALRSIGL
KCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT

NT seq 1359 nt +upstreamnt +downstreamnt
atggatactcacgacacatatttacatctccactctagtcctcttaactcgtccccctct
cagccgccggtcatgagctctatggtgggtcatccgtccgtcatcagctcctctcgcccc
ctgccgtcccccatgagcactctgggctcctctatgaatggcctgccctcaccctactcc
gtcatcaccccgtctctcagttcgccctccatttccctgccctccacacccagcatgggc
tttaacaccctcaacagcccacagatgaactctctcagtatgaatggcaatgaagacatc
aagcccccgccaggattggcaccgctgggcaacatgagcagctaccagtgcaccagccct
ggatctctgtccaaacacatctgtgccatctgtggagaccgatcttcagggaagcattat
ggtgtttatagttgtgaaggctgcaagggcttctttaagaggaccattcgaaaagacctg
acgtacacatgtcgagacattaaagagtgcctgatcgacaagcgccagcgcaaccgctgc
caatactgccgctaccagaagtgcttggccatgggcatgaagcgcgaagcggttcaggaa
gagaggcagcgagggaaagagaaaagtgatactgaggtggaaacaacaagcaggtttaat
gaagacatgcctgtggataaaatcctggatgcagaactgtcagtcgaacccaagactgag
acgtacacagagagcagccccagcaactcaacaaatgacccagtcactaatatctgccat
gcagcggataagcagttgtttactctggtggagtgggccaagagaatacctcatttctct
gatctgcctctggatgatcaagtaatccttcttcgagcaggatggaacgagctgctcatt
gcttcattctctcatcgctccatcacagtgaaagatggcatcctgctaggcacagggctt
catgtccacaggagcagtgctcacagtgcaggagttggctccattttcaacagggtactg
accgaactggtgtctaaaatgaaggacatgcagatggataagacagaactaggctgcctt
agggccatcgtcctcttcaaccctgacgccaaaggcttgtcaaactcactggaggtggag
gcactgagggagaaggtttacgcctcgctggagacctacactaaacagaaataccccgac
cagcctggcaggtttgctaagctgctgctgcgtcttcctgcgcttcgctccatcggcctc
aagtgtctggagcacctgtttttctttaagctgattggagacacacctatagacactttc
ctcatggagatgctggaagcgccacatcagatcacgtga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (4)   
   UniGene (1)   
   ENSEMBL-DRE (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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