KEGG   Danio rerio (zebrafish): 445285
Entry
445285            CDS       T01004                                 
Symbol
psmc5
Name
(RefSeq) 26S proteasome regulatory subunit 8
  KO
K03066  26S proteasome regulatory subunit T6
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03050  Proteasome
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    445285 (psmc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:dre03051]
    445285 (psmc5)
Proteasome [BR:dre03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     445285 (psmc5)
SSDB
Motif
Pfam: AAA AAA_lid_3 Prot_ATP_ID_OB_C AAA_2 AAA_5 AAA_16 AAA_22 nSTAND3 PRS7_OB RuvB_N TIP49 AAA_18 AAA_17 AAA_3 Mg_chelatase AAA_28 Parvo_NS1 AAA_14 ATPase FapA AAA_33 PhoH IstB_IS21 AAA_24 AAA_7 AAA_25 DUF815 Sigma54_activat bpMoxR DUF5906 RNA_helicase APG6_N AAA_11 Zeta_toxin AAA_19 DivIC TsaE SlyX ABC_tran HR1
Other DBs
NCBI-GeneID: 445285
NCBI-ProteinID: NP_001003740
ZFIN: ZDB-GENE-030131-6547
Ensembl: ENSDARG00000015315
UniProt: Q6AZC1
Position
12:10163645..10175487
AA seq 406 aa
MALDGIEQMDIEDSKGGSGLRQYYLSKIEELQLTVNEKSQNLRRLQAQRNELNAKVRLLR
EELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS
YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGI
AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMARE
HAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI
LDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVK
GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq 1221 nt   +upstreamnt  +downstreamnt
atggcgctggacgggatcgagcaaatggatatcgaggacagtaaaggaggctctggtctc
cgacagtattacctgtccaaaatcgaggagcttcagttgacagtaaatgagaaaagccaa
aatctcagacgcctacaggctcaaaggaatgagctaaatgccaaggtgcgtctcctgcgt
gaggagcttcagctgctgcaggaacagggctcttatgtgggagaggtggtgagagccatg
gataagaagaaagtgctggtcaaggtgcatccagaaggaaagtttgtagtggatgtggat
aagaacattgatattaatgatgtaaccccaaattgccgtgtagcacttcgaaatgacagc
tacacacttcacaaaatcctgccgaacaaggtggacccactggtctccctgatgatggtg
gagaaggtgccagattcgacgtacgagatgatcggaggactggacaaacagatcaaggag
attaaagaagtgattgaacttccagtcaaacacccagaattgtttgaagctcttggaatt
gcacaacccaagggtgtgctgctgtatggacctcctggcacaggaaagacactgttagcc
cgagctgtggctcatcacactgactgcaccttcattcgggtgtcaggatcagagctggtg
cagaagttcattggagaaggagctcgtatggtgcgcgagctgttcgtcatggccagggaa
cacgcaccctccatcatcttcatggacgagatcgactccatcggctcgtctcgtctggag
ggaggatcaggaggagacagtgaagtgcagaggaccatgctggagctcctcaaccagctg
gatggcttcgaagccaccaagaacatcaaggttatcatggcaacaaaccgtattgacatt
ctcgactctgcgcttcttcgaccaggccgcattgacaggaagatcgaattccctcctccc
aatgaagaggcccgcttggacattttgaaaatccactcgcgtaagatgaacctgacacgt
ggaattaacctacgcaagattgcagagctgatgcccggagcgtctggagctgaagtcaag
ggcgtctgcacagaggcagggatgtacgccctgagagaaaggagggtccacgttacccag
gaggactttgaaatggcagtagcaaaggtgatgcagaaagacagcgagaaaaacatgtcc
atcaagaaactctggaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (332)   
   KEGG ORTHOLOGY (1)   
   RefGene (326)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (40)   
   Pfam (40)   
All databases (385)   

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