KEGG T01004: 445302

Danio rerio (zebrafish): 445302

Entry

445302 CDS T01004

Gene name

thoc3, zgc:100815

Definition

THO complex 3

Orthology

K12880

THO complex subunit 3

Organism

dre Danio rerio (zebrafish)

Pathway

dre03013	RNA transport
dre03040	Spliceosome

Module

dre_M00406

TREX complex

Class

Genetic Information Processing; Transcription; Spliceosome [PATH:dre03040]
Genetic Information Processing; Translation; RNA transport [PATH:dre03013]

SSDB

Motif

Pfam:

WD40 eIF2A PD40 Coatomer_WDAD IKI3 Nup160 PQQ_2 Cytochrom_D1 DUF4613 DPPIV_N

Other DBs

NCBI-GI:

NCBI-GeneID:

ZFIN:

Ensembl:

Vega:

UniProt:

Position

AA seq 322 aa
MASSYYQEMQEVFRNNNKSREFPAHSAKVHSVAWSCDGKRLASGSFDKTASVFVLEKDRL
VKENNYRGHGDSVDQLCWHPTNPDLFVTASGDKTIRIWDVRTTKCMATVSTKGENINICW
SPDGQTIAVGNKDDVVTFIDAKTHRPRAEEQFKFEVNEISWNNDNDMFFLTNGNGCINIL
SYPELKLIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWNVEELVCVRCFSRLDWPV
RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEIQCESPTFTVAWHPKRPLLAYACDDK
EGKYDSNREAGTVKLFGLPNDS

NT seq 969 nt +upstreamnt +downstreamnt
atggcgtcctcgtactatcaggagatgcaggaggtgttcaggaataacaataaaagcaga
gagttcccggctcacagtgctaaagtgcactcggtggcctggagctgtgatggaaaacga
ctggcgtccggttcgtttgacaaaactgccagcgtatttgtcctggaaaaagaccgactg
gtgaaggaaaacaactaccgtgggcatggagacagtgtggatcagctgtgctggcatccc
accaaccctgatctgttcgttactgcatcaggagacaagaccatccgcatctgggatgtg
cggaccaccaaatgcatggccacagtcagcacaaaaggggagaatatcaacatttgctgg
agtcctgatggtcagaccatcgctgtaggtaacaaggatgatgttgtaacgttcattgat
gccaaaacacaccgtccacgtgctgaggagcagttcaagtttgaggtcaacgaaatctcc
tggaataatgacaatgacatgttcttcctgaccaacggcaatggatgcatcaatatatta
agttaccctgaactgaagctcatccagtcaattaatgcccatccatccaactgcatctgc
attaagtttgatccgactgggaagtattttgccactggaagtgcagatgccctggtcagc
ctgtggaacgtggaggagctggtgtgtgtgcgatgcttctcaagactggactggcctgta
cgaactcttagcttcagtcatgatggtaaaatgctggcatctgcatcagaagaccatttc
attgacatagcagaagtagagacaggggagaaactgtgggaaattcagtgcgagtctcca
accttcactgtagcctggcatccgaagaggccgctgttagcatatgcctgtgacgataaa
gagggcaaatacgacagcaaccgagaagcgggcaccgtcaaactcttcggccttcccaat
gattcctga

All links

Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (3)   
   UniGene (1)   
   ENSEMBL-DRE (1)   
   OC (1)   
   VEGA (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (10)   
   Pfam (10)   
All databases (31)   

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