Entry |
|
Gene name |
babam2
|
Definition |
(RefSeq) BRISC and BRCA1-A complex member 2
|
KO |
| BRCA1-A complex subunit BRE |
|
Organism |
dre Danio rerio (zebrafish)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:dre00001]
Genetic Information Processing
Replication and repair
03440 Homologous recombination
550474 (babam2)
Ubiquitin system [BR:dre04121]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
550474 (babam2)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
550474 (babam2)
Chromosome [BR:dre03036]
Eukaryotic Type
Centrosome formation and ciliogenesis proteins
Microtubules and associated factors
BRISC complex
550474 (babam2)
DNA repair and recombination proteins [BR:dre03400]
Eukaryotic Type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
550474 (babam2)
 |
SSDB |
   |
Motif |
 |
Other DBs |
NCBI-GeneID: NCBI-ProteinID: ZFIN: Ensembl: Vega: UniProt: |
Position |
17
|
AA seq |
386 aa  
MNSLSPELALSRISPELRPLLCSIVRNGRVGLDSSSCLRITDLKSGCTSLMPGPCCDRFK
LHIPYAGETLKWDIIFNARDPELPPDFIFGEDADFLPEPSELPNLVSWDSGKPECLLLLV
KEMLQQYHQYQCQRLRDSSRLLFEYDSLLEDPNYGRNMEIYAGRKNSWTGEFSARFLLKL
PVDFSNIPIYLLKDTALDPGEDVALLSVSFEDAEATQVFPKLYLSPSIEHALGGSSALHI
PAFPSGGCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIAAFLSHFGMGVVEYDAVGFTKL
TLLLMWKDFCFLVHVDLPLYFPRDQPTLTFQSIYHFTSSGQLYSQVQKSYPYSPRWDGNE
MAKRAKAYFKSFIPQFQEGAFANGKL |
NT seq |
1161 nt  +upstreamnt +downstreamnt
atgaatagtctctctccagagttggcattgagccgtatttctcctgagctgcggccttta
ctctgctctatagtgaggaatggacgggttggtttggattcatccagctgtctccggatt
actgacctcaagagtggctgcacatcactgatgcccggtccttgctgtgacagatttaaa
cttcatattccatatgctggagagactctcaaatgggacatcatctttaacgccagagac
ccagaactgcccccagactttatcttcggagaagatgccgactttcttcctgaaccatct
gaactcccgaacttggtttcatgggactcgggtaaaccggagtgtctcctgctgctggtg
aaggagatgctgcagcagtaccatcagtaccagtgccagcggctgcgagacagttcccgt
ttgctctttgaatacgacagcctgctcgaagacccaaactatggacgtaatatggagatc
tatgctggacgcaagaacagctggacgggggagttttctgctcgtttccttctcaagctc
cctgtggattttagcaacattcctatctatcttctcaaggacacagcactggatccagga
gaggatgtcgctcttttgtctgtcagctttgaagatgcggaagccacacaagtctttcca
aaactctacctatctcccagcattgagcatgctcttggcggatcttcagccttacatatc
ccagcatttcccagtggaggatgccttattgactacgtgcctcaagtgtgccaattactc
acaaacaaggttcagtatgtcattcaaggatatcacaagaggagagaatacattgctgct
tttctcagtcactttggcatgggtgtggtggagtatgatgctgttggctttaccaagctc
acccttctgcttatgtggaaagacttctgcttcctggtccatgtggatctgcctttgtac
ttccctcgagatcagcccaccctgacgtttcagtccatctatcacttcaccagcagtggg
cagctctactctcaggtgcaaaaatcctacccctacagtccacgctgggatgggaacgag
atggccaaacgagccaaggcttacttcaagagctttatccctcagttccaagagggggct
tttgccaatggaaagctgtag |