KEGG   Danio rerio (zebrafish): 553353Help
Entry
553353            CDS       T01004                                 

Gene name
capn1, im:7154842
Definition
si:ch211-202f3.3
Orthology
K01367  
calpain-1 [EC:3.4.22.52]
Organism
dre  Danio rerio (zebrafish)
Pathway
Protein processing in endoplasmic reticulum
Apoptosis
Brite
KEGG Orthology (KO) [BR:dre00001]
 Genetic Information Processing
  Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    553353 (capn1)
 Cellular Processes
  Cell growth and death
   04210 Apoptosis
    553353 (capn1)
Enzymes [BR:dre01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     553353 (capn1)
Peptidases [BR:dre01002]
 Cysteine Peptidases
  Family C2: calpain family
   553353 (capn1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
ZFIN: 
Ensembl: 
Vega: 
Position
17
AA seq 752 aa AA seqDB search
MSLDYVGKPEHLEEAHAITPEVGQKSAKASHRQRRRRLLWVKFLNLAFKDFKMPPPVVPH
GMCLKVMNDRNMKGGMGSDTNPLKFMDQDYNFLQDYCLKTRQRFVDEFFPPDLRSIGEGL
LKPEVMARVEWIRPTKLYPEAAEFVVDTVSRFDYAQGFIGNCWFLASVGALTFQSKLLQK
VVPDGQSLRHNYTGLFHFRFWRFGKWFDVVIDDKLPTINRQLIFVKSKTYNEFWPALLEK
AYAKVCGSYADMHTGRVSEALLDFTGGVHMHYDLKTAPTDLWEIMYRASQSEVLMGCESP
AGNEERLPNGIVLGHAYTVTKVYQVMSGRNPVQLVRLFNPWGDSEWNGDWSDNSPLWNTV
DDEDRKQLLVSDNGEFWMSMKDFLRTFDNMDICCNCPDFLEGKSACKWTSKSHNGSWVPG
STAGGCMNHPDTFCTNPQFWLRINEMDKTCDQGQNNVLVSLIQKPDKRNRRLAQHHGIGF
CVFAVPPEMRSEGKFRSSFFNRKPVVTSGNFQDARQVMKFFRLEPGEYLIVPSTYLPNKN
ADFILSILCKNDIQIQKDTERTEKDFLVDLIGVSESGCTEKEDEESKTKFLFRQYSDQYK
VVDAEKLQQILHENLLRGRKNAEGFGLDSCRSMIAMSDFCVTGRLQGSEFVRLWDRITTY
RDIFYNMDSSKDGVLSLNELQNALEKTGLHLNEDILNLMVVRYGGASEQISLEGFICLVM
RLNCMASIFQKLCENGKISLDESEWIGLTMYS
NT seq 2259 nt NT seq  +upstreamnt  +downstreamnt
atgtctttggactatgtggggaaaccagagcaccttgaagaagcccacgcaatcacgcct
gaagtggggcaaaagagtgcaaaagccagtcatagacagagaagacgacgactcctttgg
gtgaaatttctcaaccttgcatttaaagattttaaaatgcctcctccagtggttcctcat
ggcatgtgcctgaaggttatgaatgaccgtaacatgaagggcggcatgggctctgacaca
aatccactgaagttcatggaccaagactacaacttcctgcaagactactgtctcaagaca
aggcagagatttgttgatgagtttttcccaccagaccttcgttccattggcgaagggctg
ctgaagcctgaggtcatggcccgagtggagtggattagaccaacgaaattatatccagaa
gctgctgaattcgttgtagatacggtgtccaggtttgactatgcccaagggtttatagga
aactgttggtttctggcctctgttggtgccttaacatttcaaagcaaattactgcaaaag
gttgttccagatggacagtcactcagacacaattacactggcttatttcacttcaggttc
tggcgctttggaaaatggttcgatgtagtgattgacgacaagctgccaacaatcaatcgc
cagctgatctttgtcaaatctaaaacatataatgagttctggccagccttgctggagaaa
gcatatgccaaggtatgtggctcctatgctgacatgcacaccggccgagtgtctgaggcc
ctgctggacttcactggcggggttcatatgcactacgatctgaaaacggctccgactgat
ctgtgggagataatgtaccgtgcttcccagtcagaggtccttatgggctgtgaaagccca
gcagggaatgaggagcggttaccaaatggcatagttctgggccacgcttacactgtgaca
aaggtctaccaggtcatgagtggtagaaatcctgttcagctggtgagattgttcaaccca
tggggagacagtgagtggaatggagactggagtgacaattcacctttatggaacacggtc
gatgatgaggaccgcaaacagcttctcgtatctgataatggagagttctggatgtcaatg
aaagatttccttagaacatttgacaacatggacatctgttgtaactgtcctgattttctg
gaaggaaagtctgcatgcaagtggacctccaagtcccacaacggcagctgggttcctgga
agtacagctggaggctgcatgaaccacccagacaccttctgcaccaacccccagttctgg
ctgagaattaatgagatggacaagacgtgtgaccaaggccaaaacaatgttctggtgtcc
ctcatacagaaacctgacaagaggaacagacgtctggctcaacaccacggaattggcttc
tgcgtgtttgcggttccaccagagatgagatctgagggaaagttcagatcaagctttttt
aatagaaagcctgtggtgacaagtgggaactttcaggacgcaagacaggtgatgaagttc
ttcaggctggaaccaggagagtatctcattgtaccgtccacttacttgcctaataagaac
gcagatttcattctgtccatcctctgcaagaatgacatccagatacaaaaggacacagaa
agaacagagaaagattttcttgtggatcttattggagtgtctgagtctggttgcacagaa
aaggaggatgaagagtcaaaaacaaaatttctgtttcgacagtattctgatcagtacaaa
gttgtggatgctgagaaactccagcagattcttcatgaaaatctgcttagagggagaaaa
aatgctgaaggatttgggctggattcctgtagaagtatgattgccatgtcagatttttgt
gtcactggaagacttcagggatcagaatttgttcgtctgtgggaccggattacaacctac
agggacatcttctacaacatggactcttctaaagatggtgttctgtctttgaatgaactt
caaaatgcattagagaaaacaggcctacatctaaacgaagacatcttgaatctcatggtg
gtgcggtacggtggtgcatctgaacagatctcgttggagggattcatatgccttgtcatg
cgtttgaactgcatggccagcatatttcagaaactctgtgaaaatgggaagataagtctt
gatgagagtgagtggataggactcaccatgtactcatga

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