KEGG   Danio rerio (zebrafish): 555459Help
Entry
555459            CDS       T01004                                 

Gene name
otud5a, DUBA, otud5, si:bz30i22.1, si:rp71-30i22.1, zgc:154072
Definition
OTU deubiquitinase 5a (EC:3.4.19.12)
Orthology
K12655  
OTU domain-containing protein 5 [EC:3.4.19.12]
Organism
dre  Danio rerio (zebrafish)
Pathway
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:dre00001]
 Organismal Systems
  Immune system
   04622 RIG-I-like receptor signaling pathway
    555459 (otud5a)
Enzymes [BR:dre01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     555459 (otud5a)
Peptidases [BR:dre01002]
 Cysteine Peptidases
  Family C85: DUBA deubiquitinylating enzyme
   555459 (otud5a)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
ZFIN: 
Ensembl: 
Vega: 
UniProt: 
Position
8
AA seq 560 aa AA seqDB search
MTILPKKKPNSSVGVSDHPDDPDRRTGSDPHQHQHQHSHGVRPGARPRASPPPWSYQAAP
PASREDRRTESSSRPQQASPPPVGAGSSGGPGDATGMACVSGNRAELSGGVGCGGGMGGC
CSGPGLSKRRRQATCSGGVAGGGTGPGAAGGGGGGGGGGGVGGPSPEQEEGAGYNSEDEY
ENASRLQSEDPATVEQQEHWFEKALQEKKGFVIKKMKEDGACLFRAVADQVYGDQDMHEV
VRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQSG
TEPINTFHGIHQNNDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPAFKPGFADQSLMKN
AIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQPRKASAT
CSSATAAASSGLEEWNARSPRQRSSAPSPEIPDPAHSDTAAKPPSPAGALALSKPPSPCA
PGPSNQACVGPDRPTSSSLVSLYPALGYRAIMQEMSPTAFGLTDWEDDEILASVLAVSQQ
EYLDSMKKNAMHREPSPDSS
NT seq 1683 nt NT seq  +upstreamnt  +downstreamnt
atgacgatcctgccgaagaagaagccgaactcgtcggtcggtgtgtccgatcaccctgac
gaccccgaccgacggaccggctccgacccgcaccagcatcagcaccaacactcccacggg
gtccggccgggtgcgaggccccgcgcttccccgccaccctggtcctatcaagccgctccg
ccggcgtccagagaggacaggcgaactgaatccagctcccggccgcagcaggcctctcct
ccgccggtgggtgccgggtcctcgggtggccccggggacgcgacagggatggcgtgcgtg
tcaggcaatcgggctgagctgtcaggtggggtgggctgtggaggtggcatgggaggttgc
tgttcggggcctgggctcagtaagagaagacgacaagcgacttgctccggtggggtggcc
ggtggaggcaccggacccggggctgcggggggtggaggcggcggtggtggaggaggtgga
gtagggggtcccagtcccgagcaggaggaaggagccgggtataacagtgaggatgagtat
gagaatgcttccagactacagtcagaggacccagcgactgttgaacagcaggaacactgg
tttgaaaaagcactccaggaaaagaaaggatttgtcatcaaaaaaatgaaggaagatggt
gcctgcctcttcagagctgttgctgatcaagtttacggagaccaggatatgcacgaagtc
gttcgcaagcactgcatggattacttgatgaaaaatgcagattacttctcaaactatgtg
acagaggacttcactacatacatcaacagaaagaggaagaacaactgtcatggcaaccac
attgagatgcaggcaatggcagagatgtacaatcggccagttgaagtttatcagtccggc
acagaaccaatcaacacgttccatggcatccatcaaaataatgacgagccaatcagagtt
agttaccatcgaaacattcactataactctgtagtgaatcccaacaaagccactattgga
gttgggctcggacttcctgccttcaaacccgggttcgcagatcagtcactcatgaagaat
gccatcaaaacgtcagaggaatcctggattgagcaacagatgctggaggacaagaagagg
gctacagattgggaagccaccaatgaggctatagaagagcaagtggccagagaatcgtat
ttacagtggcttcgagatcaggagaaacaggcacgacagcctcgtaaggccagtgctacg
tgcagctctgccacggctgcggcctccagtggtttggaagaatggaatgctcgatctcca
cggcaacgaagctccgccccttctccagagattcctgatcccgcacactcggacacagcg
gccaaacccccgtcccccgccggagccctcgctctgtccaaacctccgtcgccctgcgca
ccaggtcccagtaaccaggcttgcgttggaccagacagacccacctcgtcttctctggtg
tctctgtatccagcactcggttatcgggccattatgcaagagatgtcccctactgcattt
ggcctcacagactgggaagacgatgagatactggcgtcggtcttggccgtgtcacaacag
gaatacctcgatagcatgaagaaaaacgccatgcatagagaaccttctccagacagcagt
tga

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