KEGG T01004: 555578

Danio rerio (zebrafish): 555578

Entry

555578 CDS T01004

Gene name

rxraa, RXRalpha-B

Definition

retinoid X receptor, alpha a

Orthology

K08524

retinoid X receptor alpha

Organism

dre Danio rerio (zebrafish)

Pathway

dre03320	PPAR signaling pathway
dre04920	Adipocytokine signaling pathway

Class

Organismal Systems; Endocrine system; Adipocytokine signaling pathway [PATH:dre04920]
Organismal Systems; Endocrine system; PPAR signaling pathway [PATH:dre03320]

SSDB

Motif

Pfam:

Hormone_recep zf-C4 Nuc_recep-AF1

Other DBs

NCBI-GI:

NCBI-GeneID:

ZFIN:

Ensembl:

Vega:

UniProt:

Position

AA seq 458 aa
MLLSAFLPTDCTGQVTSSPLSSPTSHRGMHPSLLSPTSLGPSGSLHSPISTLSSPMNGLG
SPFSVISSPMGPHSMASPGVGYGPSISPQLNSPMNSVSSSEDIKPPLGLNGVMKVPAQPS
GTPLSLTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQR
NRCQYCRYQKCLAMGMKREAVQEERQRAKERSENEVESTSSANEDMPVEKILEAELAVEP
KTETYIETNVPMPSNSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAG
WNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDK
TELGCLRAIVLFNPDSKGLSNPGEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPA
LRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT

NT seq 1377 nt +upstreamnt +downstreamnt
atgcttctttctgctttcctccccacagactgcactggacaggtgacatcctctcctctc
agctcacccacgtcccaccggggcatgcacccgtcactgctgagtccaacttcattaggc
ccctcggggtccctgcactcccccatcagcactctgagctcacctatgaatggcctgggc
tctcccttctccgtcatcagctcgcctatggggcctcattcaatggcatctcctggagtg
ggttacggccccagtatcagccctcagttgaactcgcccatgaactctgtcagcagctca
gaggatattaagccgcccttaggcctcaacggtgtgatgaaggttccagcccagccctcg
ggcaccccactctctctcaccaaacacatctgtgccatctgtggcgaccgctcctcaggt
aaacactacggtgtgtacagctgcgagggatgtaagggtttcttcaagaggacagtgcgt
aaagacctgacctacacctgtcgagacaataaggactgtgttatagacaaacgccagcgc
aaccgctgccagtactgccgctatcagaagtgtttggccatgggcatgaagagagaagcc
gtccaggaggagcgccagcgagccaaggaacgcagtgagaacgaagtggagtcgaccagc
agcgccaatgaagacatgcccgtggagaagatactggaagcagagcttgctgtggagccc
aagacggaaacttacattgagactaatgtacccatgccatcaaattcacccaacgatcca
gtcaccaacatttgtcaggctgcagacaagcagctctttactctggtggagtgggcgaag
aggattccacacttttctgagctcccgcttgacgaccaggtcattctactacgagcagga
tggaatgagctcctcattgcgtcattttcgcaccgatccatagcagtgaaagatggaata
ctgttggccacaggattacatgtgcaccgaaacagcgcccacagtgccggagtaggagcc
atatttgacagagtgctgacggagttggtatcaaagatgagagacatgcagatggataaa
acagagcttggatgtcttcgagccattgtactatttaacccagactccaaaggcctgtca
aaccctggtgaagtggaagcactgagagagaaggtctatgcctctctggaagcttactgc
aaacataagtaccctgaacaacctggaaggtttgctaagctgttgctgcggctccctgca
ctgcgctctatcggactcaagtgtttggagcatctgttcttcttcaagctcataggcgac
acacccatcgacaccttcctcatggagatgctagaagctccacaccaaatgacataa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (3)   
   UniGene (1)   
   ENSEMBL-DRE (1)   
   OC (1)   
   VEGA (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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