KEGG   Danio rerio (zebrafish): 556702
Entry
556702            CDS       T01004                                 
Symbol
yars2
Name
(RefSeq) tyrosine--tRNA ligase, mitochondrial
  KO
K01866  tyrosyl-tRNA synthetase [EC:6.1.1.1]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    556702 (yars2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:dre01007]
    556702 (yars2)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dre03016]
    556702 (yars2)
   03029 Mitochondrial biogenesis [BR:dre03029]
    556702 (yars2)
Enzymes [BR:dre01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.1  tyrosine---tRNA ligase
     556702 (yars2)
Amino acid related enzymes [BR:dre01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   556702 (yars2)
Transfer RNA biogenesis [BR:dre03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    556702 (yars2)
 Prokaryotic type
    556702 (yars2)
Mitochondrial biogenesis [BR:dre03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    556702 (yars2)
SSDB
Motif
Pfam: tRNA-synt_1b S4
Other DBs
NCBI-GeneID: 556702
NCBI-ProteinID: NP_001137392
ZFIN: ZDB-GENE-030131-6268
Ensembl: ENSDARG00000077299
UniProt: F1Q4R5
Position
25:2263724..2277256
AA seq 474 aa
MAASIARSCCRVKSHFILRKTSYCKLLFHSSASKTSSLLSSLHNRGLLKDSFPEVAAQAE
IPDLLRSGPQSIYCGFDPTADSLHAGNLLAIIGLLHFRSAGHHIIALLGGATAQIGDPSG
RQTERERLSPAAVQENARGILESLHRIFTHHELYFCPDSSRLGRLTVLNNRSWYKDYDLL
EFFSEVGRSFRMGTMLSRHSVQTRLKSAEGMSFTEFSYQLFQAFDFYQLHQLHGCRIQLG
GTDQLGNIMSGHEFIHRKTGEEVYGLTVPLVTTSMGDKLGKTAGNAVWLNRDKTSPFEFY
QYFLRLPDNSVERYLKLFTFLSLSEVENLMEQQRKDPGKRIAHKRLAAEVTKLVHGKDGL
ESAKRCTTALYHSSIEALEQMSDTELQEIFREAPFHEFFLEPGTTVLDACRRARAIPDGP
RGYQMIKDGGVWINHQRAENPEQVLIVGQQILSNGLSLIRVGKKNFHILKWLSL
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggctgcgtccatagcccggtcatgctgcagagtaaagtcacatttcatcctcagaaaa
acgtcgtattgtaaattattatttcactcctccgcatccaaaaccagcagcctcctctcc
tctctccataaccggggtctcctgaaggactctttcccggaggtcgcggctcaagccgaa
atcccggatctcctgcgctccggtccgcagtcgatatactgcggcttcgaccccaccgcc
gacagcctgcacgctggaaacctgctcgccatcatcggcctgctgcactttcgatccgcg
gggcatcacatcatcgcgctgctcggcggagccacggcgcagatcggcgacccgagcggg
aggcagaccgagagagagcgcctgtccccggccgcggtgcaggagaacgcccgcgggatt
ctggagagtctccaccggatcttcacccaccacgagctgtacttctgcccggactccagc
aggctcggccggctcacagtgctcaacaaccgcagctggtataaagactatgacctgctg
gagtttttctcagaggtgggcaggagttttcgaatgggcacgatgctcagcagacacagc
gtccagacacggctaaagagcgcggagggcatgagcttcacagagttctcctatcagctc
ttccaggcgttcgacttctaccagctccatcagctgcacggatgcaggatccagctcgga
ggaacagaccagctgggaaacatcatgagcggacacgagttcatacacagaaagactgga
gaggaggtttacggcctcacggttcctctcgtcaccacctctatgggtgataaactgggg
aagacggcaggcaacgccgtctggctgaaccgagataaaacatcaccctttgagttctac
cagtacttcctccgtctgcctgataacagcgtggagcggtacctgaagctcttcaccttc
ctctctctgtctgaggtggagaacctgatggagcagcagagaaaagacccgggaaagagg
atcgcacacaaacgcctggctgcggaagtcaccaaactggtccacggcaaagacggctta
gaaagcgctaaaaggtgcacgacagctctatatcacagcagtattgaggctctggagcag
atgagtgacactgaactgcaggagattttccgagaggctccattccatgagtttttcctt
gaaccaggaacgacggttctggacgcctgcagacgagcacgagctattcctgacggaccc
cgcggctatcagatgatcaaggacggcggtgtctggataaaccaccagagggccgaaaac
ccagagcaagtgcttattgttggtcagcaaatcctctcaaacggactcagtctgatccgt
gtcggcaagaagaacttccacatcctcaagtggctcagtttgtga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (46)   

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