KEGG   Danio rerio (zebrafish): 557675Help
Entry
557675            CDS       T01004                                 

Gene name
c1galt1a, wu:fi11c09, zgc:153355
Definition
core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a (EC:2.4.1.122)
Orthology
K00731  
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:2.4.1.122]
Organism
dre  Danio rerio (zebrafish)
Pathway
Mucin type O-Glycan biosynthesis
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dre00001]
 Metabolism
  Glycan biosynthesis and metabolism
   00512 Mucin type O-glycan biosynthesis
    557675 (c1galt1a)
Enzymes [BR:dre01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.122  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase
     557675 (c1galt1a)
Glycosyltransferases [BR:dre01003]
 Glycan extension
  Type 3 chain
   557675 (c1galt1a)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
ZFIN: 
Ensembl: 
Vega: 
UniProt: 
Position
23
AA seq 408 aa AA seqDB search
MVIMKAGSSRCAFSLGFLVGSCSLYVFLRQVWFEESFSWQSNGRSSPSPPISHEQNSSNL
TWRVEGSALINLKHPNQPGEDGHIADELFKKVRILCWVMTGPSNLQSKAQHVKNTWSRHC
NVVLFMSSEEDRSFPTVGLGTGEGRDQLYWKTIRAFHYALKNHGHEADWFLKADDDTFVV
VDNLRWILSNYTPEQPIYFGKRFKPYTKQGYMSGGAGYVLSKEALRRFVEGFSTKVCTHT
TPVEDLAMGQCLEKMGVLAGDSRDSLHRETFHPFIPEHHLTGKFSKTFWYWNYCYYPIVE
GPQCCSDLAVSFHYVDPVLMYTLEYYTYHLRPFGYQHRYQPPVPAVLSLLSQTVKTTTET
QRSEEGAKEKPALTNSVNPRAEEVQTTETSYKITNAAQERNTTHRSAG
NT seq 1227 nt NT seq  +upstreamnt  +downstreamnt
atggtcatcatgaaagcaggcagttcaaggtgcgccttctccctgggtttcctggtgggc
agctgtagtttgtacgtcttcctgaggcaggtttggtttgaggagagcttcagctggcag
agcaatggcaggagcagcccgtctccaccaataagccacgagcaaaactcctccaacctt
acctggagagttgaaggatctgccctgatcaacctcaagcatcctaaccagccaggagag
gacggtcacatagccgatgagctgttcaagaaagtgcgaatcctgtgctgggtgatgacc
ggacccagtaacctccagtcaaaagctcagcacgtgaagaacacatggagtcgccactgt
aacgtagtgctatttatgagctcagaagaagaccgcagtttccccacggttggcctcggc
actggtgaaggccgagaccaactgtactggaagaccatccgtgccttccactacgcccta
aagaaccacggccatgaggcagactggttcctcaaagcagacgatgatacttttgttgtt
gtggacaatttgcgatggatcctgtcgaactacacaccggagcagcctatatattttggc
aagcgatttaagccgtacaccaagcagggctacatgagcggtggcgcagggtatgtgctc
agtaaagaagctctaagaaggtttgtggaggggtttagcactaaagtgtgcactcatact
acaccggtggaggatctggcgatggggcagtgtctggagaaaatgggggtcctggctgga
gactcgagggactcgctgcacagagaaacctttcatccttttattcccgagcatcatctt
actggaaagttctccaagaccttctggtactggaattattgctattacccaattgtagaa
ggccctcagtgctgctctgatctggcagtttctttccactacgtagatcctgtgctcatg
tacacccttgaatactacacttaccatctgaggccgtttggctaccagcaccgctaccag
cctccagtgcctgctgtcctgtcattactgtcccaaactgtgaaaaccaccacagaaact
cagagatcggaggagggcgctaaagaaaaaccagctttaacaaactcagtgaatcccaga
gctgaagaagtacagacaactgaaacaagttacaaaatcacaaatgctgcccaggagaga
aacacaacccacagaagtgcagggtga

DBGET integrated database retrieval system