KEGG   Danio rerio (zebrafish): 558011Help
Entry
558011            CDS       T01004                                 

Gene name
usp13, wu:fc61g08
Definition
ubiquitin specific peptidase 13 (isopeptidase T-3) (EC:3.4.19.12)
Orthology
K11836  
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.1.2.15]
Organism
dre  Danio rerio (zebrafish)
Class
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
ZFIN: 
UniProt: 
Position
6
AA seq 860 aa AA seqDB search
MATDLGELLVPYMPTIRVPRTGDRVFKSECAFSYDSPESEGGLYVCMNSFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAIPRRRNGKVFLDLELNRDFNGDDYEYEDEAKL
VIFPDHYEIPLPNIEELPALVTIACDAVLNAPSPYKKQESDSWEEEIQVSRHARSLRQLD
NGVRIPPSGWKCAKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYRESNFPLAVK
LNTITPDGADIYSFDEEEAVLDPHISEHLLHFGIDMLQMQRTENGHHTDNHVQPRISDWE
VIQEAGLKLKPVYGSGYTGIKNLGNSCYLSTTMQVLFSIPEFQRAYAGNLQRIFDYSPLD
PTQDFNTQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKQQQQRGISPKMFKALVSKGH
PEFSSNRQQDAHEFLLHLINLVERNNSGSENPSDVFRFIVEERTQCCQSQKVRYTQRVDY
LMQLPVPLEAASNREELIAYEGKRKEAEENMRPLPEVVRARVPFTACLQAFTEPENVPDF
WSSALQAKSAGVKTSRFATFPEYMIVQLKKFTFGVDWVPKKLDMSVDVPDFLDLNRLRAT
GLQAGEEELPDLTPPIVIPEDTRDSSTNNSLESPEIDESSVMQLAEMGFPLEACRKAVYY
TGNMGAEMAFNWIIAHMEEPDFAEPLAVPTYMESDLPSPSLPTTSALDNQPPEESISILT
SMGFPRHHTIRALKASNNNLERALDWIFTHPDCEDESEAMSDTADTEPNDNSFSNANAHT
DSSLSPDQDLSSPRVRDGPGRYELFAFISHMGTSTMSGHYVCHIKKEGRWLIYNDHKVCL
SERPPKDLGYMYFYRRLSSC
NT seq 2583 nt NT seq  +upstreamnt  +downstreamnt
atggctacagatctgggagagctgctggtcccgtacatgcccaccattagagtaccgagg
acaggagacagggttttcaagagcgagtgcgctttttcctacgactctcctgaatcagaa
ggtggtctgtatgtgtgtatgaactcattcctgggttttggaagagaacacgtggagaga
cattaccgtaaaactggacagagtgtgtacatgcacttaaagcggcatgttaaagagaaa
gccacaggtgctgcagggggtgccataccaagaaggaggaatggaaaagtatttttagat
ttagagcttaaccgtgattttaacggggatgattatgagtatgaagatgaagccaagctt
gtcatatttccagaccactatgagatccctctaccaaatattgaggagttgcctgcactg
gtgacaatagcctgtgacgccgtcctcaatgctccatctccatacaaaaagcaggaatca
gattcatgggaagaggagatccaagtttctagacatgctagaagtctaagacagcttgat
aatggcgttcgaattcctcccagcggatggaagtgtgccaagtgtgaaatgagagagaac
ctgtggctaaacctgacggatggctctgtcctctgtgggaaatggttctttgatgggagc
ggagggaacggacatgcccttgagcactacagagaaagcaacttccccctggcagttaaa
ctcaacacaatcaccccagatggagcagatatttattcctttgatgaagaagaagcagtg
cttgatcctcacatatctgaacatttattacacttcggaattgatatgctacaaatgcaa
aggacagagaatggccatcatacagacaaccacgttcaaccgcgtatcagtgactgggaa
gtgattcaggaggcaggtctaaagttaaagcctgtctatggttcaggatatacaggcatc
aaaaacctgggcaacagctgctacctgagcaccactatgcaagtgcttttcagtattcca
gagttccagagagcgtatgctgggaacctacagagaatatttgactactcacccctcgat
ccaactcaggatttcaacacacagatggcaaaacttgggcatggacttctctcaggccaa
tactctaaacctccaatgaaatcagaacttattgaacaggtgatgaaagaagaacacaag
cagcagcagcaaagggggatttcacctaagatgttcaaagcgctggtcagtaaaggacat
ccagagttctcctcaaatcgacaacaagatgcccatgaattcctcttgcacttaattaac
ctggttgagaggaacaattcaggctctgagaaccccagcgacgtgttcagatttattgtg
gaggagcgaacacagtgctgtcagtcgcagaaggtgcgatacacacagcgagtggactac
cttatgcagcttcctgtgcctttagaggcagccagcaacagagaggagctaatagcatat
gagggtaaacggaaggaagccgaggagaacatgcggccccttccagaggtggtgagagcc
agagtgcctttcactgcctgtctgcaagccttcactgagccggagaatgtgccagacttc
tggagctctgcgctgcaggccaaatcagccggagtgaagacttctcgttttgcaactttc
ccagagtacatgatcgtgcagctaaagaagttcacatttggtgtcgattgggtgcctaaa
aagttagatatgtcagtagatgtacctgatttcttggatctgaatcgccttagagccaca
ggtctacaggctggagaagaggaattgcctgatcttacacctcccattgtcattcctgaa
gacacccgagacagttcaacaaacaactctttggaatctccagaaatagatgaatcatct
gtgatgcagctggcagagatgggctttcctttggaagcctgtcggaaggctgtgtactat
actgggaatatgggagcagagatggcctttaactggataatagcacacatggaggagcca
gattttgctgagcctctggctgttcccacttacatggaatcagatctgcccagtccgagt
cttcctacaaccagtgcactggacaaccagcctccagaggagagcatctccatcctcacc
tctatgggcttccccaggcatcacacaatccgggccctcaaagcctcaaacaacaacttg
gaacgagctcttgactggattttcacacacccagactgtgaggatgaaagtgaagctatg
tcagacacagcagacacagagccgaatgataacagcttctcaaacgccaacgcccacact
gactcctcactgtctccagatcaggatctgtctagccctcgagtcagagacggacccggc
cgttacgaactgtttgctttcatcagtcacatgggaacatccacaatgtctggccattat
gtgtgtcatatcaaaaaagagggcagatggctgatttacaatgaccataaagtatgtttg
tcagagaggcctcctaaagacttgggctacatgtacttttaccggcgcctgtcaagctgc
taa

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