KEGG   Danio rerio (zebrafish): 558937
Entry
558937            CDS       T01004                                 
Symbol
dhx32b
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
  KO
K18994  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:5.6.2.6]
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dre03041]
    558937 (dhx32b)
Spliceosome [BR:dre03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    558937 (dhx32b)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C HA2_N
Other DBs
NCBI-GeneID: 558937
NCBI-ProteinID: XP_687318
ZFIN: ZDB-GENE-130613-5
Ensembl: ENSDARG00000079029
UniProt: X1WHV8
Position
17:32343118..32360481
AA seq 729 aa
MEMELSTDVEELSKTTESQDIDSDDLLELNQFDGLPFSSRYYKLLRERKCLPVWEAKCEF
MDSLINSQIVIVTGTAKTGQSTQIPQWCAEFCLSAQYQNGMVVCTQIHHQTTVELALRVA
DEMDVNIGNEVGYSIPLQACCSQDTVLRYCTDDVLLREMMSDPLLEQCGVVVLDQAQERT
VSTDLLLGLLKDVLLTRPELRLVILSAPHSSEKLLRHYGSVPQIKLEGPQPCEVLFGSGR
GGVKDYLCSALRLALEIHQNENHGDIVAFLATEQEIECAHAILRREGANLALSHGELVPV
SLCPRQGDSLSLTEESKSRRVFLTCSPSEDLFWALHTIRFVIDAGVQKRYVYNPRIRANS
IVIRPISKSQAESRKQLAGPTGKCFCLYQEDTSLPAESVPHLLESDITSTVLFLKRMEIA
GLSHCDLIDRPDPEGLMQALEELDYLAALDDDGNLSEIGIIMSEFPLEPQMAKTLLASCE
FDCVCEVLTIAAMLTAPSCFIIPPVEMRQKALLCHQKFQHAEGDHFTLINIFNAYRYAKD
GSYSKVEQWCDEHFLSLAALQTADAIRSELTEILKRLELPVSLPAFGSRSNSLNVRRALL
AGFFMQVARDIDGSGNYFMLTHKHVAQIHPLSGYGLEVNKKNLPEWVLYHEHTLSENNCI
RTVSQISAIEFIQMAPQYFFYNLPSSESKDLLQHTIDHGTAAPSKGKRKCQNSSSAATEE
QTPERCTIQ
NT seq 2190 nt   +upstreamnt  +downstreamnt
atggagatggagctatcaacagatgtggaggaactatcaaaaaccactgaaagtcaagac
attgattcggacgacctgctggagttgaatcagttcgacggactgccattttcttcaaga
tattacaaattattaagagaaagaaagtgtttgccggtgtgggaagcgaaatgcgagttt
atggacagcttgatcaacagccagattgtgatcgtcacaggcacagctaaaacaggacaa
agcactcagatccctcagtggtgtgcagagttttgcctgtctgcgcagtatcagaacggc
atggtggtgtgcactcagattcaccatcagacaactgtggagctggccctgcgtgtagcc
gacgagatggatgtgaacatcggcaatgaggttggatatagcatcccgcttcaggcctgc
tgctcccaagacactgtactcagatactgcacagatgacgtgctgctccgggaaatgatg
tcagaccctctgttggagcagtgtggtgtggtggtcctcgatcaggcccaagaacgcacc
gtcagcacagacctgcttctcggactgctcaaagacgtgctcctgacgcggccagagctc
cggctggtcatcctcagcgctccgcactcctcagagaagctgctgagacactatggaagt
gttcctcagatcaagctggaaggaccacagccatgcgaagtgctgtttggtagtgggaga
ggaggagtgaaggattacctctgctctgctcttagactcgctctggagatacaccagaat
gaaaaccatggagacattgtggcatttctggcaactgagcaagagattgaatgtgcccat
gccattttgcggagagagggtgccaatctcgctctgtctcatggagagctggtgcccgtg
tctctgtgcccaaggcaaggtgacagtctctcactgactgaggagagcaaaagcaggaga
gtcttcctcacctgcagccccagcgaagatctcttctgggcccttcacaccattcgcttt
gtgattgatgctggagtgcagaaaagatatgtgtacaatccccgaatcagagccaactca
attgtaattcgaccaatcagcaagagccaagctgagagccgcaaacaactcgcaggccca
acaggcaagtgcttctgtttgtatcaagaagacacttcacttcctgccgagagcgtccca
caccttctagagtctgacatcacttccactgtgcttttcctaaagcgcatggaaatagct
ggtttgagccactgtgacttaattgacagaccagatcccgaaggcctcatgcaagcttta
gaggaactggactatctcgccgcactggatgatgacggaaatctgtccgagattggaatt
atcatgtcagagtttcctctggagccacagatggctaagactttgcttgcgtcctgtgaa
tttgactgtgtgtgtgaagtgctgaccatcgctgccatgctaacagctccaagctgcttc
attataccccctgtggaaatgagacagaaggccttactgtgtcatcagaagttccagcat
gccgagggagatcatttcactcttattaatatcttcaatgcctacagatatgcaaaggat
ggatcatactctaaagtggagcagtggtgtgatgagcatttcctaagtctggctgctctt
cagacggcagatgccatacgctctgagctaacagaaatcctgaaacgcctagagctgcct
gtgtccttacccgcctttggttctagaagcaacagcttaaacgtcagacgtgccctacta
gctggattcttcatgcaggtggcgagggacatcgacgggtcagggaattacttcatgtta
acccataagcatgtggctcagatccaccctctgtccggctatggacttgaggtgaacaag
aagaacctgcctgaatgggttctgtaccatgagcacacgctgtcagagaacaactgtatc
agaaccgtctctcagatctcagcgatcgagttcattcagatggcaccgcagtacttcttt
tacaacctgccatctagtgaaagtaaagacctactgcagcacactatagatcacggtact
gctgctccatctaaaggcaaaagaaaatgccagaactccagcagtgctgccactgaagag
cagacccccgagcgctgcactatacagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

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