KEGG   Danio rerio (zebrafish): 563778Help
Entry
563778            CDS       T01004                                 

Gene name
usp38
Definition
ubiquitin specific peptidase 38
Orthology
K11854  
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:3.4.19.12]
Organism
dre  Danio rerio (zebrafish)
Brite
Enzymes [BR:dre01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     563778 (usp38)
Peptidases [BR:dre01002]
 Cysteine Peptidases
  Family C19: ubiquitin-specific protease family
   563778 (usp38)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Ensembl: 
Position
1
AA seq 1014 aa AA seqDB search
MDKILEALVSSSHPQNVKRAIVKKVMEAAEKEVTEEQCQALYHLTTRLILQGEDVFQRQI
GFQVQEAYARYHRDEFARFFSKEFVLGLLQQGYGSLDHRDPAILDFIHSSLRLLISCPAV
LELAPLLQTEVLRIICERPEPATCAKLATILTDFSQCIPRDKAGVLFCQQLVRTFAYFHC
PASEERELREYVTQVSRVSALLQVIWKAEPTTLLPSLQEVFSIISSTDPSFEPSIALASL
VQHIPLQMITVLIKSLTTDQNVKDASMTQALCRMIDWLSWPLANHVDTWVIALLKGLAAV
QKFTILIDVTLLKIEQVFNRLWYPIVRQGALVVLSHMLLSFQHSPEAFHLVVPHIVPLVK
SLKNDGLPNSKTFLLQFAELIHCMMYQYSGFPDLYDSILESIKELPKPSEEKIKFVLNQS
AWTSQSNSFASGLLKITGKSETGKTGLVNLGNTCYMNSILQILFMATDFRRHVMSLQLNG
SNTLMKKLQLLFAFLAHTQRAAYSPRSFLDVSRPTWFSAGSQQDCSEYLRFLLDRLHEEE
KALSALQTASPKPEPATTSPETLHNAVSPPISDVPSHPDPAAAQGETGTLVERMFGGRLS
TAIRCLQCHSLSEKEEPFTDLSLAFCPSMSQPRGPTNEHKSSSTLGPCQGAVNGGSEASE
GPVKEGAASGMERPMVEPTISVPDLVDYFLAPEILENENCYFCERCASLQRAEKAMRVVA
APEYLILTLLRFSYDATCHVRRKILDNVGIPLHMSLPLHQHSSSSSSNVAASSSTESPDS
CENLAKKLKPSQKEEGIAESRMKSKKNNSDLQKLSVPYVLSSVVMHSGMSSDSGHYYSYG
RNVSSDDGCVAHTSPKSLDNSSQSESSTAPQEETGRADPKSADWFLFNDSRVTFTNFQSL
QNVTSRFPKDTAYVLIYRKQEVSGEASNSGPVVNGARLSGEPPLQKELMDAITKDNKLFL
QEQELNARTRALQATSASCSFRPNGSDDNEPPGSCGPSGGGGGGGFNTISRLVF
NT seq 3045 nt NT seq  +upstreamnt  +downstreamnt
atggataagattttggaggcgctggtcagttcctcccatcctcagaatgtcaagcgggct
atcgtgaaaaaagtgatggaggctgcagaaaaggaggtgacggaggagcagtgccaggcc
ttgtaccatctcaccacccgccttattctccagggtgaagatgtttttcagcgtcagatt
ggtttccaagtgcaagaagcatacgcacgctaccatcgtgatgagtttgcccgcttcttc
agcaaggaatttgtgcttggccttcttcaacagggctatggctctttggaccatagagac
cctgcaatcttggacttcattcacagttctctcagactgctcatcagctgcccggctgtg
ttggaactggcacctctgctacagacggaggtcctacgcatcatctgtgaacggccagaa
ccagcgacatgtgccaagttggccaccatacttacagacttctctcagtgcatcccacga
gacaaggcaggagttctgttctgccaacagcttgtgcgcacctttgcatattttcactgt
cctgccagtgaagagcgggagctgcgggaatatgtgacccaggtgagcagggtgagcgca
cttctgcaggtcatctggaaggctgagcccaccacactgctgccatcactacaggaggtg
ttttccattatctcatccacagatccttcgtttgaaccatctattgctctagcaagcctg
gtccagcacatccctctgcaaatgatcacagtcctcatcaaaagcctcaccactgaccag
aatgttaaagatgcaagtatgacacaagcactctgcaggatgattgactggttgtcatgg
cctctagctaatcatgtggacacctgggtcattgctttattaaaaggacttgctgctgtt
caaaagttcaccatcctcatagatgtcacactgctcaaaattgaacaggtctttaatcgt
ctctggtatcccattgtgaggcagggagcgctggttgttctttcacatatgctgcttagt
ttccagcactctcctgaagcctttcacttagtggttcctcatatagtgccacttgtgaag
tctttaaagaatgatggccttccgaacagtaaaacgttcttactacaatttgctgaactc
attcattgcatgatgtaccaatattccggattcccagacctctacgacagcattcttgaa
tccattaaagaactgcctaaacctagtgaggagaagatcaaatttgttctgaaccaaagt
gcctggacatctcagtcaaattcatttgcttcaggcctgctcaagatcacaggcaaatca
gaaacagggaagacaggacttgtgaatctgggcaacacatgctacatgaacagcatcctc
caaattttatttatggccacagatttcaggcgacatgttatgtctctgcaattgaatggc
agcaacacgctcatgaagaagcttcagcttctttttgctttcttggctcacacacagaga
gcagcatattcaccaaggagttttttggatgtttctcgacctacttggttttcagccgga
tcccagcaagactgctcagagtatttgaggtttctgttggacaggttgcatgaagaagag
aaggccctttcagcccttcagacggccagcccaaaaccagaaccggcaaccacttctcca
gaaactctccacaatgctgtaagcccaccgatctctgatgtgccatcgcacccagatcct
gcagcagctcaaggagaaaccggcactctagtggagcgcatgtttggtgggagactctcc
acagcaatccgctgcctgcagtgccacagcctatcagagaaagaggagccattcacagac
ctctctcttgccttctgcccctccatgtcacagccacggggtcccactaatgagcacaaa
agctcctctactctgggaccctgccagggggcagtgaatggaggcagtgaagcctccgag
ggccccgtcaaagaaggtgcagcaagcgggatggagaggcccatggtggaaccaacaata
tctgtgccagatttagtggactattttttggctccagaaattttagagaacgagaactgc
tacttttgcgaacgctgtgcctcactgcagagggctgagaaggctatgcgagtggtggca
gcccctgaatatctcattctgactctgttacgcttctcttacgatgccacctgccatgtg
cggcgcaagatcctggacaatgtgggcattcctctgcacatgtcccttcctttacatcaa
cacagtagctcttcatcttcaaatgtagctgcatcttcctcaaccgagtctccagacagt
tgcgagaatctggctaaaaagctgaagccttcacagaaagaggaaggaattgcagaaagc
agaatgaagagcaagaaaaataacagtgatttgcagaagctctctgtgccgtatgtgttg
agttctgttgtgatgcactctgggatgtcttccgatagcggtcactactactcgtatgga
aggaacgtgagtagcgatgatggttgtgtggctcacacgagtcccaagagcctggataat
tctagccaatcagagagctcgacagccccacaggaggaaacggggcgtgctgatccaaag
tcggcggactggttcttgtttaatgacagcagagtgacttttacgaactttcagtcattg
caaaatgtcacaagccgcttccccaaggatacagcctatgtcctgatctacaggaaacaa
gaggtcagtggagaagcaagcaattcagggccggttgtaaatggcgcaaggctgagtgga
gagccacctctgcagaaagagctgatggatgccattaccaaagacaacaaactcttccta
caggagcaggagcttaacgccagaactcgggctcttcaagcaacctctgcatcctgttca
ttcagacccaatggttctgatgacaacgagcctcctggcagctgcgggccatcaggtgga
ggtggaggagggggatttaacaccatcagcagactagtcttttaa

DBGET integrated database retrieval system