KEGG   Danio rerio (zebrafish): 564533
Entry
564533            CDS       T01004                                 
Symbol
stag1a
Name
(RefSeq) cohesin subunit SA-1a
  KO
K06671  cohesin complex subunit SA-1/2
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    564533 (stag1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    564533 (stag1a)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    564533 (stag1a)
SSDB
Motif
Pfam: STAG SCD Cnd1
Other DBs
NCBI-GeneID: 564533
NCBI-ProteinID: NP_001349269
ZFIN: ZDB-GENE-070912-448
Ensembl: ENSDARG00000061205
Position
2:25018995..25108587
AA seq 1258 aa
MITSELPVLQDTGDSGQDTVSLSMSMSELDDPGDGKIKKKRGRPGRPPAANKKPRKSPSE
KGFMAVQRGRKANGISQQNGEGDPVTLFEVVKQGKSAMQSVVDDWIESYKQDRDLALLDL
INFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTISGPLWKKFRYNFCE
FICVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNL
SINQDNTQRQYEAERSKIVGKRATEKLELLLQKRKELQENQDEIENMMNSIFKGIFVHRY
RDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNLYTN
RELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILQGSEDALSNEDCENVYHLV
YSAHRPVAVAAGEFLHRKLFSRHDPQAEEALAKRRGRSSPNGNLIRMLVLFFLESELHEH
AAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEVLADRQESSLIELTVCTIRQAAEAH
PPVGRGTGKRVLTAKERKMQIDDKNKLTEHFIMALPMLLSKYQTDSEKVANLLQIPQYFD
LDVYSAGRMEKHLDALLKQIKFVVEKHTDTEVLEACSKTYSILCSEEYTIMNRVDIARSQ
LIDELADRFNHSVEELLQAGEEADDDDIYNVLSTLKRLTAFHNAHDLTRWDFFGNCYRLL
RTGIEQGSMPEQIAVQALQCSHYSILWQLVKITEGAPSKDDLLALRRVVKSFLAICQQCL
SNVNTPVKEQAFMLLCDLLMIFSHQLTTGSREGLQPLVFIPDGTLQNELLNFILDHVFID
QDDENQSIEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIIDMPAAADIFKHYMKYYNDY
GDIIKETLSKTRQTDKILCAKTLILSLQQLFNELIQDQGPNLDRTSSHVSGIKELARRFA
LTFGLDQIKTREAVATLHKDGIEFAFKYQNPKGAEYPPPNLAFLEVLCEFSSKLLRQDKK
TVHAYLEKFMTEQMMERREDIWLPLISYRNSLLTGGDEDRMSITSGSSSSKAGSIRSKKG
RPPLHKKRIEEESMEGSWMMRNDSIQTPGGLQTPQLTSTVLRENPRQAAEHLPEQDTEPG
SESDYVHNPQMQMSWLGQQKMEEVNRKERTAMSYIKARSGGVRQTVRGLMEDDAEPIFED
VMMSSRGQLEDMSEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAMIEDESGFTMPMF
NT seq 3777 nt   +upstreamnt  +downstreamnt
atgatcacctcagagctgccggtgctacaggacactggtgattcaggtcaggacacagtg
agtctcagtatgagcatgagtgagctggatgaccctggagacggaaagatcaagaagaag
agaggaagacctggcagaccaccagcagccaacaagaagcctcggaagtctccatcagaa
aagggctttatggcagtccagagggggagaaaggccaatggcatcagccagcagaatgga
gagggagatcctgttactctgtttgaagtggtcaaacagggaaagagtgctatgcagtct
gtggttgatgactggatcgagtcgtataagcaggacagagatctagcacttctggacctc
atcaacttcttcatccagtgctctggctgtaaaggcactgtaagaatcgaaatgtttcgc
aatatgcagaatgctgaaatcatccgcaaaatgacagaagagtttgatgaggacagtggc
gattaccctttgaccatttctggccctctgtggaagaagtttcgctacaacttctgtgag
ttcatctgtgtactgatccgccagtgccagtacagcatcatctatgatgaatacatgatg
gacacagtcatctctctgctcacgggcctgtcagactcacaggtccgagccttcagacac
accagcactctcgcagccatgaagctgatgacagctctggtgaacgtggctctgaacctg
agcattaaccaggacaacacacagagacagtacgaagctgaacgcagcaaaatagtggga
aagagagccactgagaagctggagctcttgcttcaaaagaggaaagagcttcaagaaaac
caagatgaaatcgaaaacatgatgaactccattttcaagggaatctttgttcatcgctat
agggatgcaatagctgaaatcagagccatttgtatagaggagatcggtgtatggatgaaa
atgtacagtgatgccttcttgaacgacagctacctgaagtatgtgggctggaccttacat
gaccggcaaggtgaagtgcgcttgaagtgtttgaaagccttacaaaacctttacacaaac
cgtgaactgtttccaaaacttgagctcttcacaaaccgcttcaaggaccgtatcgtgtcc
atgacgctggataaagagtatgatgttgctgtggaggccatcagactggtcacgctcatc
ctgcagggtagtgaggatgctctgtctaatgaagactgtgagaatgtgtatcatctggtg
tattcagctcacaggcctgtagcagtggctgctggggagtttctacatcggaagttgttc
agcagacatgatcctcaggcagaggaagctctagccaagcgcagaggcaggagcagccca
aacggaaacctaatccgcatgctggtgcttttctttttggagagtgagctgcatgaacat
gctgcctatctagtggacagtttgtgggagagctctcaggagctgctgaaggactgggag
tgcatgactgaactgctactggaggagccagtgcagggagaggaggtgttggcagacaga
caggagagttctctgattgaactgactgtatgtaccattcgtcaggctgcagaggcccat
ccgccagtggggagaggaactggaaaaagggtcttgactgcgaaagaaaggaagatgcag
attgatgacaaaaacaaattaacagagcatttcatcatggctctccccatgctgctctca
aaataccagacagattcagagaaagtagccaatcttctgcagatcccacagtactttgac
ctggacgtgtacagcgctgggagaatggagaagcacttggacgcattgctaaagcagatc
aagtttgtagtggagaagcacacggacacagaagtgctggaggcctgcagtaaaacatac
agcatcttgtgcagtgaagaatacaccattatgaaccgcgtggacattgcccgcagtcag
ctgatcgatgaactagccgaccgtttcaaccactcggtggaggagctgctgcaagcgggg
gaagaggcagatgatgacgacatttacaatgttctctccactctgaagagacttacagcc
tttcacaatgctcatgatttgaccagatgggatttttttggaaactgctacagattgcta
agaacaggaatagagcagggctccatgcctgagcagatagcagtgcaggctcttcagtgt
tctcattactccatactctggcagctggtgaagataactgagggagctccatccaaggat
gatctcctagcactacgtagggttgtcaagtcttttctagctatatgccagcagtgtcta
tcaaatgtcaacacgccggtaaaagagcaggcattcatgctgctctgtgacctgctgatg
atcttcagtcaccagcttaccacaggctccagagagggtttgcagccgctagtcttcatc
ccagacggcacgctgcagaacgagctcctaaacttcattcttgatcatgtgtttatagat
caagatgatgagaaccagagcatagagggtgatgaagaggatgaagcaaacaagattgag
gccttacacaagaggaggaaccttctagctgccttcagcaaactcatcatttatgacatc
atagacatgcctgctgctgcagacatcttcaaacactacatgaagtactacaacgattat
ggcgacatcatcaaggagactttaagtaagaccagacagacggacaagatactgtgtgcc
aaaacactcatcttgagtttacaacagctctttaatgagctgatccaggatcaggggcct
aacttggacaggacctcgtctcatgtgagcggcattaaggaactggcccgtcgctttgcc
ctcaccttcggattagaccagatcaagaccagagaggctgtagctacactgcacaaagat
gggattgagtttgccttcaagtaccagaatccaaaaggagcagagtatcctcctcccaat
ctggccttccttgaggttctctgtgaattttcttccaagcttcttcgtcaagacaagaaa
acagtacatgcatatctggagaagttcatgacggagcagatgatggagcggcgggaggac
atctggcttccactcatctcctacaggaactctctgctgacgggtggagatgaagatcgc
atgtccatcaccagcggcagcagcagtagcaaagctggatccatacgcagcaagaagggc
cgaccgccactgcacaagaaacgcattgaggaggagagcatggagggctcttggatgatg
aggaatgacagcattcagacccctggaggcctgcagacgccacagctcacctcaactgtg
ctccgcgaaaaccctcgacaagctgctgaacacctgcctgagcaggacactgagcccggc
tcagagtcggactatgttcataatcctcagatgcagatgtcgtggctcggccagcagaag
atggaggaggtgaacaggaaggagcggacggccatgagctacataaaggcccgcagtgga
ggagtgcgacagactgtacgtgggctaatggaggacgacgcagagcccatctttgaggac
gtcatgatgtcgtctcgaggacagctggaggacatgagtgaggagtttgaggacaccatg
gtcatcgatctgcctccatccaggaaccggcgagagagagcagaactcagaccagacttc
tttgactctgcagccatgattgaggatgagtcgggattcacgatgcccatgttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

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