KEGG T01004: 565482

Danio rerio (zebrafish): 565482

Entry

565482 CDS T01004

Gene name

hdac6, wu:fc31d02

Definition

histone deacetylase 6

Orthology

K11407

histone deacetylase 6/10 [EC:3.5.1.98]

Organism

dre Danio rerio (zebrafish)

Class

SSDB

Motif

Pfam:

Hist_deacetyl zf-UBP

Other DBs

NCBI-GI:

NCBI-GeneID:

ZFIN:

Ensembl:

Vega:

UniProt:

Position

AA seq 1081 aa
MDAVPDTKGSSGPPRGTPETKNNKKNLQEARRKGRMDRSKAEEEMSNELQNLDVQGKSKA
TGTGLVYVDAFTRFHCLWDASHPECPARVSTVMEMLETEGLLGRCVQVEARAVTEDELLL
VHTKEYVELMKSTQNMTEEELKTLAEKYDSVYLHPGFFSSACLSVGSVLQLVDKVMTSQL
RNGFSINRPPGHHAQADKMNGFCMFNNLAIAARYAQKRHRVQRVLIVDWDVHHGQGIQYI
FEEDPSVLYFSVHRYEDGSFWPHLKESDSSSVGSGAGQGYNINLPWNKVGMESGDYITAF
QQLLLPVAYEFQPQLVLVAAGFDAVIGDPKGGMQVSPECFSILTHMLKGVAQGRLVLALE
GGYNLQSTAEGVCASMRSLLGDPCPHLPSSGAPCESALKSISKTISDLYPFWKSLQTFEG
GPLSEVSPLPAPVCAEVKVSSPITGLVYDQRMMLHHNMWDSHHPELPQRISRIFSRHEEL
RLLSRCHRIPARLATEEELALCHSSKHISIIKSSEHMKPRDLNRLGDEYNSIFISNESYT
CALLAAGSCFNSAQAILTGQVRNAVAIVRPPGHHAEKDTACGFCFFNTAALTARYAQSIT
RESLRVLIVDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGAFFPNSEDANYDKVGLGKGR
GYNVNIPWNGGKMGDPEYMAAFHHLVMPIAREFAPELVLVSAGFDAARGDPLGGFQVTPE
GYAHLTHQLMSLAAGRVLIILEGGYNLTSISESMSMCTSMLLGDSPPSLDHLTPLKTSAT
VSINNVLRAHAPFWSSLRVNIPESLRLSLPSPKPKGKCTPGGKGKKSPRQSTPSQSPGQA
THRPDQSGFDELTADLLSLNLNTSTSSNTSPESVAVGGARRKVKPNTHRVSAGLESESPL
KLNPEKAGAGDDTDVKAETPNRSISEPVVTCDSSAVKDQESLVLEAAGGNTVQSVLERVF
GAQATDVDTMYVVDPLPWCPHLESVRPVPAGGIDVFQPCEECGGEAENWICLFCYKVLCG
RYVNQHMVTHGQESGHPVVLSFADLSVWCYACESYVHNKVLHEAKNAAHLVKFGEGIHPF
N

NT seq 3246 nt +upstreamnt +downstreamnt
atggatgcggttccagataccaaaggttcttcaggacctccgagaggaacgccagaaaca
aaaaacaataagaagaatctacaagaggccaggagaaaaggcagaatggatcggagcaaa
gctgaagaggagatgagcaatgaactgcaaaatctggatgttcaaggaaagagcaaagcg
acaggaacaggtcttgtatatgtagacgccttcactcgctttcactgcctctgggatgcc
agtcatccagagtgtccagcgagagtgagcacggtaatggagatgctggagactgagggt
ctgctgggacgctgtgtacaagtggaggctagagctgtgacagaagatgagctgctactc
gtgcacacgaaagagtatgtagaactgatgaaatccacacagaacatgacagaggaagaa
ctgaagactcttgctgagaaatatgactcggtttacctgcatcctgggtttttcagctcc
gcctgtctgtcagtgggatcagttctccagctggtggataaggtgatgacatcacagctg
cgtaatggcttctccatcaacaggcctccaggtcaccatgctcaggcagataagatgaac
ggcttctgtatgtttaataatctggccatagcagcacgatatgctcagaaacgacacagg
gttcaacgagttttaattgtggactgggatgtgcatcacggacagggaatccagtatatt
tttgaagaggatcccagtgtgctgtatttctcagtgcacagatatgaagacggctcattc
tggccccatctaaaggagtctgacagcagttcggttggctcaggagcaggacaaggctat
aatatcaacctgccctggaacaaggtggggatggaaagtggagattacatcacagctttc
cagcagcttctcctgcctgtggcatacgagtttcagcctcaactggtgttagtggccgct
ggatttgacgctgtgatcggtgacccaaagggcgggatgcaagtgagtcctgagtgtttc
tccattctgacacacatgctgaaaggtgttgcacagggaaggcttgtgctggctttagag
ggtgggtataacctgcagtccacagcggagggtgtttgcgctagtatgaggtctcttctg
ggtgacccctgccctcacctgccctcttctggcgctccctgtgaaagtgccttgaagtca
atctcaaagaccatctcagacttgtatccattttggaagagtcttcaaacttttgaaggt
ggtcctctgtctgaagtctcccccctgcccgctccagtatgtgcagaagtgaaggtttct
tctccgatcactgggctagtttatgaccagagaatgatgcttcatcacaacatgtgggac
agtcatcatccagagctccctcagagaatttcacgaatcttctcccgccatgaggagttg
cgcctgctgtcccgttgtcatcggataccagctcgcctagcaacagaagaggagctggcg
ctctgtcacagttccaagcatataagcatcattaagagttcagagcacatgaaacccaga
gatctaaaccgactgggggacgaatacaactccattttcatcagcaatgagagctacact
tgtgccctgctggctgctggctcgtgctttaattctgcacaggccatactcacaggccag
gtgagaaacgctgtggctatagtccgtcctccgggtcatcatgctgagaaagacacagct
tgtgggttctgtttctttaacacagccgctttgactgcacgctatgcccagagcatcacg
cgtgaatctctgcgcgtcctcattgtcgactgggacgttcaccatggaaacggcacacag
cacatcttcgaggaggatgacagtgttctgtacatctccctgcatcgctacgaagatggg
gcattcttcccaaactcagaggatgctaactatgataaggtgggactggggaaaggcaga
ggatacaacgtcaacatcccctggaacggagggaaaatgggagacccagaatacatggcg
gctttccatcacttagtgatgcccatagcaagagagtttgccccagagctggtgctggtc
tctgctgggtttgatgcagcacgaggtgatccgttaggagggtttcaggtgaccccggag
ggctatgctcacctcacccatcagctaatgagtctggctgcaggaagagtgcttatcatt
ctggagggtggttataacctcacttccatctcggagtccatgtccatgtgcaccagtatg
ttgttgggagactctccgccttctctagaccacctgacccctctgaagaccagcgccact
gtcagtattaataatgtcctgcgtgctcacgcccccttctggagctctcttagagtcaac
attccagaatctcttcgtttgtctctaccttcacctaaaccaaaaggcaaatgtacaccg
ggggggaagggtaagaagtctcctcgccaatccaccccttctcagagtcccggacaggca
acacatcgtcccgaccaatccggcttcgatgagctcactgcggatctgctttctctgaat
ctcaacaccagcacctcatctaacaccagcccagagtcagtcgctgttggaggagccagg
cggaaggtgaaacccaacacacacagagtttcagcaggcctggagtcagaatcaccccta
aaactcaaccctgagaaagccggagctggagacgacacagatgtaaaagcagagacacct
aaccgttcgatctcagagcctgtggtcacctgtgattcatcagccgtgaaggatcaggag
agtttagttctggaggctgctggaggaaacactgtgcagtcagtcttagagcgcgtcttt
ggagcacaagccaccgatgtggacactatgtatgtggtggatccgttgccatggtgccca
cacttggagtcagtgcgaccggtgcctgcaggagggattgatgtctttcagccgtgtgaa
gagtgtggaggtgaagcggaaaactggatctgcctcttctgctataaggtgctttgcggg
cgttatgtgaaccagcacatggtgacccacgggcaggagtctgggcatcctgttgtgctt
agctttgctgacctttctgtgtggtgttacgcttgtgaatcatacgtccataacaaggtt
ctgcatgaagccaaaaatgctgctcatcttgtgaagtttggagaggggattcatcctttc
aactaa

All links

Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UniGene (1)   
   ENSEMBL-DRE (1)   
   OC (1)   
   VEGA (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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