KEGG   Danio rerio (zebrafish): 566033
Entry
566033            CDS       T01004                                 
Symbol
cwc22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dre03041]
    566033 (cwc22)
Spliceosome [BR:dre03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    566033 (cwc22)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    566033 (cwc22)
SSDB
Motif
Pfam: MA3 MIF4G Cnd1
Other DBs
NCBI-GeneID: 566033
NCBI-ProteinID: NP_001071037
ZFIN: ZDB-GENE-060929-452
Ensembl: ENSDARG00000014008
UniProt: B0S6B1
Position
9:complement(43552515..43644261)
AA seq 983 aa
MAAESNESQTAMNMGPTSRDEPPSTEEMEQRQRKASTSSSEDGEHEDNDRRRVVGSPGSR
DGSPRVGSPVARASPRAKRDQKSSDSDSDSSDSDDGVMRKIRSSVMHIRRTSDEETKNRE
RSSSPDRHEKKSKSRSRSRSRSRSRSRSRSPRERYRRARRSRERERDRYGDRERYERRSS
RERDWEHRRRGRSASPDKNDKPPTEEPPVKKRKETLDPILTRTGGAYIPPAKLRMMQAQI
TDKSSLEYQRMSWEALKKSINGLINKVNVSNIANIIQELLQENIVRGRGLLARSILQAQA
ASPIFTHVYSAVVAIINSKFPQIGELILKRLILNFRKGYRRNDKQQCLTASKFVGHLINQ
NVAHEVLCLEMLTLLLERPTDDSVEVAISFLKECGLKLTEVSPRGINAIFERLRNILHES
EIDKRVQYMIEVMFAIRKDGFKDHPIIPEGLDLVEEEDQFTHMLPLEDEYNTEDILNVFK
LDPNFLENEEKYKTIKREILDEGSSDSGDDAGGSGDDEDDDEEDEEAAAGEEQEKVTIFD
QTEVNLVAFRRTIYLAIQSSLDFEECAHKLIKMDFPESQTKELCNMILDCCAQQRTYEKF
FGLLAGRFCLLKKEYMESFEAIFQEQYETIHRLETNKLRNVARIFAHLLYTDSVPWSVLE
CVRMSEDTTTSSSRIFVKILFQELCAYMGLPKLNERLKDTTLQPFFEGLFPRDNPRNTRF
AINFFTSIGLGGLTDELREHLKNAPKMIMTQNQEVESSDSSSSSSSSSDSSSSSGSSSES
DSSESDSDSSSDSDSSSSSGSSSDSDSRRKKASGKKKDKSKKSSKAANQRSPLEERPTKR
HENRRQDASKEDRRGSDKHNRDPQRRGQQDESPPARPRGEPERIRGQKEPHRHAQDHQDR
PTDSGRHKDDGKNSRANKDKDRRRSREKEPLRRSRDRSKSRERSRKEMDSRDSYGNGLER
ADKENRHSDRYKESRRKDDRRHR
NT seq 2952 nt   +upstreamnt  +downstreamnt
atggcggctgagtcaaacgaatctcagacggcaatgaatatggggcctacatcgagagat
gagcctcccagcacagaagaaatggagcagcgacagagaaaggccagcacaagttcatct
gaggatggagagcatgaagataatgaccgcaggagggttgttgggtctccaggctccaga
gatggaagtccacgagtgggcagccccgtggcgagggcatcacccagagccaaacgtgat
cagaaatccagcgactctgacagtgacagcagtgacagtgatgacggtgtaatgcgtaag
attaggagcagtgtcatgcatatcaggcgtacctctgatgaagagaccaaaaacagagaa
agaagctcctcacctgaccggcatgaaaagaagtcaaaatcaagatcccgctcaagatcc
cgctccagatctcgctccagatctcgctctcctcgtgaacgttatagaagggctcgtagg
tccagggagcgagagcgggaccgttatggtgatcgggagcgttacgagcggcgctccagc
agagagagggattgggaacacaggaggaggggaaggtcagcctctccagacaaaaatgat
aaacctcccactgaggagcctccagtgaagaagaggaaggaaacgctggaccccatccta
acccgcaccggtggggcctatatcccaccggccaaactgcggatgatgcaggctcagatc
actgacaagagcagtttggagtatcagaggatgagctgggaagccctgaagaagtccatc
aatggtctgatcaacaaagtgaacgtttctaacatcgccaacattattcaggagctgctg
caggagaatattgtgaggggcaggggtcttctagccaggtctatacttcaggctcaggct
gcgtctcccatcttcactcatgtatactctgcagtggtggccatcatcaactccaagttt
cctcaaattggagaacttatcctcaagaggcttatccttaatttccggaaaggttacagg
aggaatgataaacaacaatgtctcacagcgtccaagttcgtaggtcatctcatcaaccag
aacgtggctcatgaagtcctctgtctggagatgctgaccctgctgttggaaagacctact
gatgacagtgtggaggtggccatcagcttcctaaaagagtgtggtctcaaactgacagag
gtctctcctagaggcatcaacgccatctttgaacgtctgaggaacatcttgcatgagtca
gagatagataagcgtgtacagtacatgattgaggtgatgtttgccatcaggaaggatggg
tttaaggaccatcccatcattccagaaggacttgacctagtggaggaagaggaccagttc
acacacatgcttcctctagaggatgaatacaacacagaggacatcttaaatgttttcaag
ttggatccaaacttcctggagaacgaggagaagtacaagacaattaaacgggaaattctt
gatgaaggaagcagtgattctggtgacgatgcgggcggcagtggagatgatgaagacgat
gatgaggaagatgaagaggcggcagctggagaagaacaagagaaagtcaccattttcgac
cagacagaggtgaacctggtcgcgtttcgtagaacgatttacctcgccatccagtcaagc
ttggacttcgaagaatgcgcccacaagttgataaaaatggatttccccgagagccagacg
aaagagctgtgcaacatgatcctggactgttgtgctcagcaaagaacatatgagaagttc
tttggtcttctagctgggaggttttgcctgctgaagaaagagtacatggagagctttgag
gcaattttccaggagcagtatgaaacaatccaccggctggaaaccaacaaactgcgtaac
gttgctcgaatctttgctcatctcctctacacagactcagttccatggagtgtccttgaa
tgcgttagaatgagcgaagacacaacaacatcctccagtcgaatctttgtgaagattttg
ttccaggaactttgtgcttacatgggtttgccaaaactaaatgagagattgaaggacacg
actctccagccattttttgaaggcctgtttccacgcgataacccgaggaacacaagattc
gccattaatttcttcacatctatcggccttggaggactaacggatgagctgagggaacat
ctgaaaaacgctcctaagatgatcatgacccagaatcaggaagttgagtcgtcagattct
tcctcatcctcctcatcctcttcagactcctcttcatcttcaggttcctcatctgaaagt
gacagcagtgaaagcgactctgattcgtccagtgactcagactcttcttccagcagtggc
agctcttcagactctgactccaggcgcaagaaggcctcaggtaagaaaaaggacaagagc
aagaaatccagcaaggcagcaaaccagcgatctcccttagaggaacgacccaccaagaga
cacgagaaccgccgtcaggacgccagcaaagaggaccgacgtggatctgataaacacaac
agagatcctcagcggcgcggacaacaggacgagtcacctcctgctcgaccgagaggagaa
ccagagcgcataagaggacagaaagaacctcacagacacgctcaggaccaccaggacaga
ccgacagattcaggcaggcacaaggacgacggcaaaaactcccgagcgaacaaggacaaa
gatagacggcggagcagggagaaggagcctctgcggcggagcagggacaggtcaaagtca
cgagagaggagccgcaaagagatggactccagggactcgtacggaaacggcttagagagg
gcagacaaagagaaccgccattctgacagatacaaagagtccaggaggaaagacgacagg
agacacagatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (49)   
   KEGG ORTHOLOGY (1)   
   RefGene (43)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (64)   

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