KEGG T01004: 567970

Danio rerio (zebrafish): 567970

Entry

567970 CDS T01004

Gene name

setd1ba, im:7156157, si:dkey-237o15.4

Definition

SET domain containing 1B, a (EC:2.1.1.43)

Orthology

K11422

histone-lysine N-methyltransferase SETD1 [EC:2.1.1.43]

Organism

dre Danio rerio (zebrafish)

Pathway

dre00310

Lysine degradation

Class

Metabolism; Amino acid metabolism; Lysine degradation [PATH:dre00310]

SSDB

Motif

Pfam:

N-SET SET RRM_1 RRM_5 RRM_6

Other DBs

NCBI-GI:

NCBI-GeneID:

ZFIN:

UniProt:

Position

AA seq 1844 aa
MCWKVEIVVYCKRQKPQTRGTQYVPGERNKLNEDHGRRQSSSLANGMDNSHPICSSGEKR
SHHWRSYKLIIDPALKKGSHKVYRYDGHQFSTPSFGMSPVDIVRDPRIGRLWTKYKETDL
PVPKFKIDECYVGRVPPKEVTFAKLNDNVREGFLTDMCKKFGDIEEVEILYNPKNKKHLG
IAKVVFETVKAAKDAVQNLHNTSVMGNIIHVELDPKGENRQRYFQRLINGSYTPLTLPVG
GEEACDVSPRSLAEALMACEPSRRLFEGGSSVVAGTTPSGTNTPMSLDTAYSSLRQDTPQ
SQGTPHTPRPSGTPFSQDSSYSSRQGTPAFQANRAESSGGYKSRRHETKFQDAYNRRPER
RYVHGPTQRGNTEQPPSFKQHQPPEPPSPAFTHTPPPPTSANFKTAYSQYQPPIPQEYTV
ASYHQPVQRELDYRRPPQAPPPPSTDFLPVRDRPTTPPIPEPPPAPETQPTTPPSSTPEP
CPSPTQESERNSLDSRIEMLLKPFLNERGDSDAEVRMDGSPISSSSSQLSPIPPQRPSRP
SSTGLEDISPTPLPDSEDDEPIRGTASLLANSRGMSPTNMHSKSCVGEPRTAIDKMDTGH
QSSGEDMEISDDEMPGTPIASGDCDKNIVVNSALSLIQTIPMPPPGFPPLPHAAGFPLPP
HHLPHHSTVSHLPSHHPMLHPLHSYGMMHFLPVDLLSSLPQLLQMPFQMQTQMLSRMAQS
QHPYAYPYPAPSANPAAMPFGGPYPPLSVVSAPADTLHGQPWPLPSMPQFNPAVPPPGYE
PQKEDPHKATIDGVLMAIVKELKAIMKKDLNRKMVEVVAFRKFDEWWDKQELSAKATLTP
VKTGEGKDEEKERAKPKETMSSHLPWNKGEGLGFEGMGLGIGLRGIRLPSFKVKRKQPPE
PTSTSDNKRVRPSTPVDDELEDEESERMGRTDGSRVDPAGSSSKRRPARPLELDSEGEEE
EETSGKEESSLSDHEEEPVDDASERLSSGKDLEEEDEKKSESHSSESESSDSSDDEASSS
SSSKSGSDSSGSESSSDYESSSEEEEEEEEEEERIVGMDDEEDVDARTSTSSSTTSTSSS
DEEEVVEVKAPSTPTGPPPEEEPNELGRLEAVDEAEIDHKPSMVSLIKTKVEEVRPPSPK
GLPADELDVDLEVKIPVPKTEASLEEVGNLRPPTPTGSFADSDQDTRPKIPTEDFPRTPG
HEGPVPLESETTVPRSLPTPSMHLPLPPSHVPDPQSLLPPPETLPDMPVRGRLPTEEDIP
RTPGRDLMDRARGLGKLQSTDTVPVTPGSDTPLTGNSLSSPHILGSPFSYPAQSPVLSAG
IPRTPGRDLTFAPAFPDSAGLSAGLPIHRKASSEILEEKPLFKEPLLSASPQASLPNNAA
SSPFPGPPLPTASLPEPALPPQGSPPASIENSFPASPKELPVPMIDVPVPLDDTPSKKKL
VRSKNKKGIQDSEEPQVTLIEASSLPELPVNNQYPDLPSESIKEEDGEPAFSEKEESQVP
TIIPKVEETSFYVEEPIQKTRRQRRGWQELLLSMHSPVASPRRPSFMPRSDFEEMTILYD
IWNDGIDEEDIRYLKITYDKMLQQDNAHDWLNDTLWVHHPPTNMGSATGVKKKRKEDGIR
DHVTGCARSEGYYKIDKKDKMKYLNSSRLQSEEPDVDTQGKSIPAQPQVSTRAGSERRSE
QRRLLSSFSCDSDLLKFNQLKFRKKKIRFCRSHIHDWGLFAMEPIAADEMVIEYVGQNIR
QVIADMREKRYEDEGIGSSYMFRVDHDTIIDATKCGNFARFINHSCNPNCYAKVITVESQ
KKIVIYSRQPINVNEEITYDYKFPIEDEKIPCLCGAENCRGTLN

NT seq 5535 nt +upstreamnt +downstreamnt
atgtgctggaaggttgagatagtggtgtattgtaagagacagaaaccccagactagaggc
acacaatatgtacctggagaaagaaataagctaaatgaagatcacggtagaagacagagt
tcaagtttggcgaacggaatggacaacagccatcctatctgcagttcgggagagaaacga
agtcatcattggagaagttacaagttgattattgacccagcgttgaaaaagggttcgcac
aaagtgtaccgctacgatggacatcaattcagcacgccgagctttggaatgtcacccgtg
gacatcgtccgagatccgagaatcggtcgtctgtggactaagtacaaggagactgatctc
ccggttcctaaatttaagatcgacgagtgttacgtcggccgtgttcccccgaaggaggtc
acgttcgcgaaactcaatgacaacgtcagagagggattcctcaccgacatgtgcaagaag
ttcggcgacatcgaggaggtggaaatattgtacaatccgaagaacaaaaaacatctcgga
atagctaaagttgttttcgaaaccgtcaaggcggcgaaagatgctgtccagaacttgcac
aacacgtctgtcatgggaaacatcatccacgtggagctggaccctaaaggtgaaaatcgc
cagaggtacttccagcgtcttatcaatggaagttatactccgctcactcttccagtcggt
ggcgaagaggcctgtgatgtttctccacgcagcttggctgaagccctgatggcttgcgag
ccctccagaagactgttcgaaggcggttcgtctgtagtcgcaggcacaacaccgagtggc
accaacacacccatgtccctggatacagcctactccagcctaaggcaggatacgccccag
tcgcaaggcaccccgcacaccccacgcccatcaggcaccccgttctctcaggactccagc
tactccagcaggcagggcacgccagcgttccaagccaaccgtgccgaatcatcaggaggc
tacaaatcgaggagacatgaaaccaaattccaggatgcctacaaccgtagaccagaaagg
cgatatgtccatggacccacgcaacgtggtaacacagaacagccgcctagttttaagcag
catcaaccacctgagccgccatcgcctgcattcacgcacacgccgccgccacctaccagt
gcaaattttaaaactgcttattcccaatatcaacccccaattccccaagagtacacagta
gcctcctaccaccagcctgttcagcgggaattggattacagaagaccacctcaagctccg
cctcccccaagcactgacttcctgcctgtcagagacagacccacaactccaccaatccct
gagcctcctcctgctccagagacccaaccaacgacacctccgtcttccacaccagagccc
tgtccatcgcctacccaagagtctgagcgtaacagcctagactcccgtatagaaatgctc
ctgaagcccttcctgaatgagcgcggagactcggatgctgaggtgcggatggatgggagc
ccgatctcctcctcgtcatcccagctgtccccaatcccaccccagcgaccctcgcggcct
tcaagcactggtctggaggacatcagcccaactccgctgcctgattcagaagatgatgaa
ccgatccgtggtactgcttcactgttggcaaactcaaggggtatgtcacccaccaacatg
cacagtaaaagctgtgtgggagaaccacggacggccattgacaaaatggacacgggtcat
cagtcttcaggtgaagacatggagatatctgacgatgagatgcctggcacgccgatcgcc
agcggggactgtgacaaaaacattgtggtcaactcagcattgtctctaatacagaccatc
cccatgcctccaccagggtttcccccgctgccccatgcggctggtttccccctaccgccg
caccaccttccacaccattcaaccgtttcccacttgcctagccatcacccgatgctccac
ccactgcactcttatggcatgatgcattttttacctgtagatctgcttagctctttacca
cagttgctccagatgccctttcagatgcagactcaaatgctgagtcgcatggcacagagc
cagcatccgtacgcttacccgtaccctgctcccagtgccaatcctgccgccatgccattt
gggggtccgtatccaccattgtcagtggttagcgctcctgcagacacgctccatgggcaa
ccatggccactacccagcatgccccaatttaaccccgctgttcccccacctggctacgag
ccccagaaggaagacccgcacaaagccaccatagatggagtgctgatggctatcgtcaaa
gagctgaaggccatcatgaagaaagatctcaaccgcaagatggtggaagtggtggccttc
aggaagtttgatgagtggtgggacaaacaggagctttcggcaaaggctacacttacacct
gtgaaaacaggtgagggcaaagacgaggagaaagaacgggccaaacccaaagagacaatg
tcctcgcatttaccctggaataagggcgagggtctgggctttgagggaatgggtctcggc
atcggcctgcgtggcattcgattaccgtcctttaaggttaagaggaaacagccccctgaa
ccgacatccaccagtgacaacaaaagggtccggccatccacacctgtcgacgatgagctg
gaggatgaagagtcagaaagaatgggtcgcacggacggatccagagtggatccagctggt
tcttcttctaaacgaagaccagccaggcctctggagctggacagcgaaggtgaggaggag
gaggaaacatctggtaaagaggagtcgtcactttcagatcatgaagaagagccagtggac
gatgcatctgaaaggttgtcctctggcaaggatttggaggaagaggatgaaaagaagagc
gaatcgcactccagcgagagtgaatcgtctgactcatcagatgatgaagcttccagctca
tcgtcctccaaatctggttctgattcctcagggagcgagagctcatctgactatgaatca
agttcagaggaggaagaggaagaggaggaagaagaagagcgaatagtgggaatggatgat
gaagaggatgtggatgcacgaacctcaacgtcttcatcaactacttctacttcatcctct
gatgaagaggaggttgttgaggtaaaagcccccagtacccccacaggaccacccccagaa
gaggaacccaatgagctaggcagactggaggctgtagatgaagcagagatcgatcacaaa
cctagtatggtgagcttaatcaagacaaaagttgaggaggtgcgacccccttcacccaaa
ggattgccagctgacgaactagacgttgatctggaggtgaaaattccagtgcccaaaact
gaagccagtctggaggaagttggtaacttgcgtccaccaaccccaacaggttcgtttgca
gatagtgatcaggacacccgaccaaagatccccacagaagacttccctagaacccctggt
catgaaggcccagttcccctagaatcagagaccacagtccctcgatctcttcctacaccc
tccatgcaccttccacttcctccaagtcacgttcctgatccacaatcccttcttccaccc
cctgaaactttgccggatatgcctgtgcgtgggcgcttgcctacagaagaggacatcccg
cgaacacccggtagagacctcatggatagagctcgaggtttgggcaagttgcagagcact
gatacggttcctgtcacaccaggtagtgacactcctctaacaggtaacagcttgagttcg
ccacatattctcggcagccctttctcttaccccgctcaatcccctgtgctcagtgctggc
attcctcggactccaggtcgagaccttacttttgctccagctttccctgactctgctggt
ttatctgcaggccttcctattcacaggaaggcctcgtctgagatcttggaggagaagcct
ctctttaaagagcctctactcagtgcctctccccaggccagcctacctaataatgctgct
tcttccccattccctggtcctccccttcctactgcttcacttccggagcctgctttgcct
ccccaaggctctcctcctgcttcaatagagaattcctttcccgcttctccaaaagaactt
cctgttccaatgatagatgttcctgtgcccttagatgatactccgtcaaagaagaaactg
gtacgctctaagaataaaaaagggattcaagattctgaagagcctcaagttactttaata
gaggcctcttcacttccagagctcccagtcaataaccaatacccagaccttccttcagaa
tccatcaaagaagaagatggtgaacccgcattctctgagaaagaagaaagccaagtgccg
acgatcatacccaaggttgaggagacgtctttttatgttgaggaaccaattcagaagacg
cggcgacagagacggggctggcaggagttgttgttgtctatgcactcgcctgtcgcttca
ccacgccgtcccagcttcatgccccgctctgactttgaggagatgaccatattgtatgac
atctggaatgatggcattgacgaagaggacatccgataccttaagatcacctacgacaaa
atgcttcagcaagataatgcccatgactggctcaacgacaccctctgggtccaccatcct
cctaccaacatgggcagtgcaacaggggtgaagaagaagcggaaagaagatggtatacgt
gatcatgtcacgggctgcgcccgcagcgagggttactacaaaatcgacaagaaagacaaa
atgaaatacctgaacagctcacgcttgcagtctgaagagccggatgtggacactcaggga
aagagtataccagcgcagccccaagtgtccaccagagcaggttcagagcggcggtccgaa
cagcggcgcttgctgtcgtccttcagctgtgacagtgatctcctcaagttcaaccagctc
aagtttcgtaagaagaagatccgcttctgtagaagtcacattcatgactggggattgttt
gccatggagcctattgctgctgatgagatggttattgaatacgttggccagaatatccga
caggttattgcagacatgcgagagaagcgctatgaggacgaaggcatcggtagcagctac
atgtttcgtgtggatcatgacaccattatagacgcaaccaaatgtggcaacttcgctcga
ttcatcaatcacagttgcaatccaaactgttatgccaaggtcatcactgtggagtcgcag
aaaaagatcgtcatatactcccggcagccaatcaatgttaacgaggagatcacctacgac
tacaagttccccatcgaggacgagaagataccgtgcctgtgtggtgccgagaactgcagg
ggaacgttgaactaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (3)   
   UniGene (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

Download RDF

DBGET integrated database retrieval system