KEGG T01004: 568683

Danio rerio (zebrafish): 568683

Entry

568683 CDS T01004

Gene name

usp9

Definition

ubiquitin specific peptidase 9 (EC:3.4.19.12)

Orthology

K11840

ubiquitin carboxyl-terminal hydrolase 9/24 [EC:3.1.2.15]

Organism

dre Danio rerio (zebrafish)

Class

SSDB

Motif

Pfam:

UCH UCH_1

Other DBs

NCBI-GI:

NCBI-GeneID:

ZFIN:

Ensembl:

UniProt:

Position

AA seq 2551 aa
MTATTRGSPVGGNDGQGQAPDGQSQPPLPQNQTSSPNSSNENSPVSPPDDQGQGDSPTPL
EEEEPAFPHTELAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGIDVKCEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNAHRLVELCVTKLSQDWFPLLELLAMATNP
HCKFHIYNGTRPSETVPAGVQLAEDELFARPPDPRSPKGWLVDLINKFGTLNGFQTLHDR
FMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKESWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKMQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHALVTLVAENLSAYMENMRQFSKEHADFDPQTVRPGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
GSDDIASRAIDLLKEIYTNLGPKLQANQVEIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLREYITECDSDYHEERTILPMSRAFRGKHITLVVRFPNQGRQVD
DLDIWSHTNDTIGSVRRCILNRIKANSTHTKIELFIGGEIIDPADDRKLIGQLNLKDKTL
ITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHVRYISF
LWQVADLGCNLNMPLLRDGARVLMKLMPPDNATVENLRAICLDHAKLGENSLSPTLDSRF
FGPSPSQVLYLIEVVYALLMPASGTLGEDASDFQYNFLKSGGLPLVLSMLTRNNFLPNAD
METRRGAYLNALKIAKLLLTAVGFGHVKSVAEACQPVVEGTIPVSPINQTTHDQALVLQN
ALQNIPNPSAECMLRNVAIRLAQQISDEASKYIPDICVIRAVQKIVWASGCGSVQHVFSS
NEEISKIYEKTNAGNEPDAEDEQVCCEALEVMTLCFALMPTALDALSKEKAWQTFIIDLL
LHCQSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGSTAKERAKHAADYFTLLR
HLLNYAFNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGEPGVEETILEGHIGVTKELLAF
QTPEKKFYIGCEKGGASLIKELMDDFLFPASNVYLQYMKSGEFPTEQAIPVCSTPATINA
GFELLVALAIGCVRNLKQIVDTLTDMYYLGCEPLTEWEYLPPVGPRPTKGFVGLKNAGAT
CYMNSVIQQLYMIPPIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPRDEVFGYQHQFD
DKPSLSKSEDRKEYNIGVLRQLQVIFGHLASSRLQYYVPRGFWKQFRLWGEPVNLREQHD
ALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTLNVDIR
NHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWE
RECAIKFNDYFEFPRELDMEPYTVAGVAKLEGSDVHPENQVIQQNEPSEPEPPCSSRYRL
VGVLVHSGQASGGHYYSYIIQRNGSGGEGERNRWYKFDDGDVTECKMDDDEEMKNQCFGG
EYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTLDKDSELVKYITELTVSSKPHQVKM
PSAIERSVRKQNVQFMHNRMQYSLEYFQFIRKLLTCNSVYLNSPPGQDHLLPEAEEMAMI
SIQLAARFLFSTGFHTKKIVRGPASDWYDALCILLRHSKNVRYWFAHNVLFAYPNRFSEY
LLECPSAEVRGAFSKLIVFIAHFSLQDGPCPTPIASPGPSSQGCDNLSLSEHLFRAVLNL
LRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLGVPATFMLVALDEGPGPPIKYQYA
ELGKLYTVVSQLVRCCDVTSRMQSSINGNPPLANPYGDPNTTTPIMPLQQLVVDILFVRT
SYVKKIIEDCSNSEDTIKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLLQI
LFIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCSVAYQ
ILQSNGDLKRKWTWAVEWLGDELERRPYTGNTQYTYNNWSPPVQSNETSNGYFLERSHSA
RMTLAKACELCPEEEPDEQEALDEQDPSPPEDTALYPHSPGSKFQQNNLPHTQPYTGPAA
QHVNNPQRPGPRAQENWEPPEETPQPSQTKD

NT seq 7656 nt +upstreamnt +downstreamnt
atgacggccacgacccgtggctccccggtgggagggaatgacggtcagggccaggctccg
gatggccagtcccagccacccctgccccagaaccagacatcctctcctaactcatccaac
gagaactcccctgtgagcccgccagatgaccagggtcaaggggactctcccactcctctg
gaggaggaggagcctgctttcccccacactgaactggccaagctggatgacatgatcaac
agacctcgctgggtcgttccagttttgccaaagggtgaactagaagttcttcttgaagct
gctatagatctttgtaaaaaaggaattgatgtcaagtgtgaagcatgccagaggtttttc
agagatggcttgacaatatcctttacaaaaatactgacagatgaggctgttagtggatgg
aaatttgaaatccatcggtgcatcattaataacgcccaccgactggtggagctgtgtgtg
accaagctctctcaggactggtttcctctgctagaactcttggccatggccaccaacccc
cactgtaagttccacatctacaatggtactcggccctctgagactgtgccagctggggtt
cagctagctgaagatgagctgtttgcccgtccacctgaccctcgctctcccaagggttgg
ttggtggatttaataaacaaatttggcacattaaacgggtttcaaactctgcatgatcga
ttcatgagcggccaggctctaaatgttcagatcattgctgcactcattaagccttttgga
cagtgctatgagtttctcactttgcacacggtgaagaagtacttccttcccatcatagaa
atggttccccagtttctagaaaacctcacagatgaggaattgaaaaaggaagcaaagaat
gaagccaaaaacgatgccctgtcgatgataatcaaatctttgaagaacctggcatctcga
gtaccaggacaagaggaaacagtgaagaatttagagatatttaggttaaaaatgattctt
aggttattgcagatttcatcttttaatggcaaaatgaatgcactaaatgaagtaaacaag
gtgatttcgagtgtttcctactacacacatcgtcacggcaatcctgaagaggaagagtgg
ttgacagcagaacgcatggctgaatggattcagcagaacaacattttgtctattgtgctg
cgagacagccttcatcagccacagtatgtggagaaactggagaagatcctgcgatttgtc
atcaaagaaaaagctctaacgctacaggacctggacaacatctgggctgctcaggctggg
aaacatgaggctattgtcaagaatgttcatgatcttcttgcaaagctggcgtgggatttc
tcaccggaacagctggaccatctcttcgactgcttcaaggaaagttggactaatgcgagt
aaaaagcagagggagaagttactggaattgattcgtcgactggcggaagatgacaaggat
ggtgtgatggctcacaaagtgctcaacctcctatggaatttggcccatagtgatgatgtt
cctgtggatatcatggaccaggctcttagtgctcatatcaagattttggactatagctgc
tcccaggacagggacacacagaagatgcagtggatagacagattcatagaagaattgaga
actaatgacaaatgggtgattcctgcactgaagcaaataagggagatctgtagccttttt
ggagaagccccacagaatttaagtcaaacccagcggagcccacatgtcttctatcgacat
gatctaatcaaccaactacagcataaccatgcactggttacacttgtagcagagaacctg
tctgcgtacatggagaatatgaggcagttctcaaaagagcatgccgactttgatcctcag
acagttcggccaggaagtcgatatagtcatgttcaagaggttcaggagcggcttaatttc
ttaagattcttactgaaagatgggcagctctggctatgcgctccccaggctaagcagatc
tggaagtgcctggcggagaatgctgtgttcttgtgtgatcgggaggcctgctttaaatgg
tactccaaactgatgggggacgaacctgaccttgaccctgacatcaacaaggacttcttt
gagaacaatgtgctgcaactcgacccctcactgctgacggagaacgggatgaaatgcttt
gagcgatttttcaaggctgtcaactgcagggagggcaaactggttgcaaaacggcgggcg
tatatgatggatgacttggagcttatagggctggattacctgtggagggttgtgattcaa
ggaagcgatgatattgctagccgagcaattgacttgcttaaagagatttatacaaacctt
ggaccaaaattacaagccaatcaggttgagattcatgaggattttattcagtcttgcttt
gaccggctcaaagcctcctatgacactttgtgtgtgctggacggagataaagacagcatt
aactgcgccaggcaggaggccattcgcatggtgagagtactgactgtgctcagggagtat
ataacagagtgtgacagcgactaccatgaggaaaggaccatcctgcccatgtccagggct
tttagaggaaagcatatcacactagttgtgcgttttccaaaccaaggccgacaggttgat
gatctggacatttggtcacataccaatgacacaattggttctgtgcgacgctgcatccta
aaccgaataaaggcaaacagcacacacacaaagattgaactcttcatcggaggagagatc
attgacccagcagatgacaggaagctaattgggcagctaaacctcaaagacaaaacactc
atcacagccaagctcacccaggtcagcgccaacatgccttccagtccagacagctcctca
gactcctccactggttcccctgggaatcatggcaatcactacagtgatgggccaaaccct
gaagtagagagctgtcttcctggtgtgataatgtctctacacgtgcgctacatctccttc
ctctggcaagttgcggacctgggctgtaatctcaacatgcctctcctacgggatggcgct
cgtgtcctaatgaagctcatgcctccagataatgccacagtggaaaacctgcgagccatc
tgtctggatcatgccaaacttggtgaaaacagccttagccccacgttggactcgcgcttc
tttgggccgtcaccgtctcaagtgctttacctgatagaggtggtgtatgcattgctcatg
cctgccagcgggacattgggtgaggatgctagcgacttccaatacaacttcttgaagagt
ggtggcctgcccctggttttgagcatgctcaccagaaataacttcctgccaaatgctgac
atggagacccggcggggagcttatctcaacgcactaaaaatagccaaactgctgcttaca
gctgtaggctttggccatgtgaagtctgtggcggaggcctgccagcctgtggtggagggg
actatccctgtgtcgcctatcaaccagaccacacatgaccaggctctagtgctccagaat
gccttgcagaatatccccaacccctctgccgagtgcatgctgcgcaatgtggccatccgc
ctcgcccaacagatctccgatgaggcctccaaatacatcccagatatctgtgtaattcga
gcagttcagaagatagtctgggcttctggttgtggctctgttcagcatgtcttcagttcc
aatgaggagatcagcaagatctatgagaagaccaatgctggcaatgagccggatgcagaa
gatgagcaggtgtgctgtgaagctctggaggtcatgaccctgtgtttcgctcttatgccc
actgcactagatgcacttagcaaagaaaaggcttggcagaccttcattatagatctgctg
ctgcactgccagagcaagtctgttcgtcaaatggctcaagagcagtttttcctcatggcc
actcgatgttgcatgggtcataggcctctcctgttcttcatcaccctcctcttcacagtt
ttaggtagcactgcaaaagagcgagctaagcacgctgctgattacttcactcttctaagg
cacttactcaactatgcatttaacagcaacataaatcttccgaacgctgaagttctctta
aacaatgagattgactggctgaagcgcatccgggatgaagtgaaaaggactggagagcct
ggggttgaggaaaccattttggaaggtcacattggtgtcaccaaagagctactggctttc
cagaccccagaaaagaagttctacattggctgtgaaaaaggaggggctagtctcatcaag
gagttaatggatgacttcctgttcccagcatctaatgtgtacttgcagtatatgaagagt
ggagaattccccactgagcaggccatacctgtgtgtagcacccctgccaccattaatgcc
ggctttgagcttctggttgcacttgccatcggatgtgtgcgaaatctgaagcagattgtg
gacacgttaactgatatgtactatttaggttgtgaaccactcacagaatgggaatatttg
ccaccagttggtccacggcccaccaagggctttgtgggtctgaaaaatgcaggtgcaact
tgctacatgaactctgtgatccagcagctctacatgattcctcccatcagaaacggcatc
ttggccattgaaggcacaggcagtgatgtggatgacgatatgtctggagacgagaagcaa
gataatgagagtaatgtggatccccgtgatgaggtgtttggctatcagcaccaatttgat
gataaaccctctctcagtaagtcagaggacaggaaggaatacaacattggggttcttcgc
caattgcaggtcatctttggacacttggcttcctccaggttgcaatattatgtgcctaga
ggattctggaagcaatttcggctgtggggagagccagtcaatctgagggagcagcatgat
gccctggagttcttcaactcgctggttgacagtttagatgaagctttgaaagcattgggt
caccctgccatgctgagcaaagtgctgggcggctcttttgctgaccagaaaatatgtcag
ggctgtcctcacagatatgaatgtgaggaatcatttacgacattgaatgtagatatcaga
aaccatcaaaatctgctcgattctatggaacagtatgtgaaaggggacttgcttgaaggt
gcaaatgcctaccactgtgaaaaatgcaacaagaaggtggacacagtgaagcgtttactc
attaagaagcttcctccggtgctggccatccagttgaaacggtttgattatgactgggaa
cgagagtgtgccattaagttcaatgactactttgagtttccacgagagttggacatggaa
ccctatacagtagcaggagtagctaagctggaagggtcagacgtgcacccagaaaaccag
gtgatccagcagaatgagccatcagagccggagccgccctgcagctctcgctatcgtttg
gtgggagtgctggtccactcaggacaggctagtggaggtcattattactcttacatcatt
cagaggaatggcagcggtggcgagggagaaagaaaccgttggtataagtttgatgatggt
gacgtcaccgagtgcaagatggatgacgatgaggagatgaagaaccagtgctttggagga
gagtacatgggtgaggttttcgaccacatgatgaagcgcatgtcttacaggcgacagaag
cgctggtggaacgcttatatcctgttttatgagcggatggacacattggacaaggacagc
gagctggttaaatacatcactgagctcacggtgagcagcaaacctcatcaagtgaagatg
ccctctgctattgagcgcagcgtgcgcaaacaaaatgtgcagtttatgcacaaccgcatg
cagtacagcttggagtacttccaattcatcaggaaactgctgacctgtaacagtgtctac
ttgaactcaccgccaggtcaagaccaccttttgcctgaagcagaggagatggctatgatc
agtatacagctcgctgctagatttctcttcagtactggattccacaccaagaaaatagtc
cgtggcccagctagtgattggtatgatgctctgtgcatcttgttgagacacagtaagaat
gtgcgttactggtttgcacacaacgtcctctttgcatatccgaatcgtttctccgagtac
ctgcttgagtgccccagtgcagaggttcgaggggccttctccaaactcatcgtattcatt
gcacatttctccctgcaagatggaccctgccccacaccgattgcctcacctggaccttca
agtcagggctgtgataatttgagtttaagtgagcacttgttccgtgctgtgcttaatctt
ctacgaagggaagtgtctgaacatggccgtcacctgcagcagtactttaaccttttcgtc
atgtatgccaaccttggcttggcagagaagacacagctgttgaagcttggggtaccagcc
actttcatgcttgtggcactggatgagggtccgggccctccaattaagtaccagtatgct
gagctgggaaagctctatactgttgtctcacagctagttcgctgctgtgatgtgacatca
cgcatgcagtcctcaattaatggtaaccctccgctggctaacccatatggagaccccaac
accaccactcccatcatgcccctgcagcagttggtggtggacatcctttttgtgcgcacc
agttatgtgaagaagattatcgaggactgcagtaactcggaggacactatcaaactgctg
agattctgctgttgggagaaccctcagttttcctccactgtgcttagtgaactactgtgg
caggtggcgtattcatacacgtatgagttaaggccttacctggacttgctccttcagatc
ttgtttattgaggactcatggcagactcacagaatccacaatgttctgaagggaattccc
gatgaccgcgatgggctttttgacaccattcagcgctccaaaaaccactaccaaaagaga
gcttatcagtgcatcaaatgcatggtggctctcttcagcaactgctcagtggcctatcag
attctccagagtaatggagatctaaagaggaagtggacctgggcagtggagtggctcggt
gatgagttggaacggagaccttacactggcaacactcagtacacctacaacaactggtcc
cctcctgtccagagcaatgaaacctccaatggatacttcctggagcgctcccacagtgcc
cggatgaccttagccaaggcctgtgagttgtgcccagaagaggagcctgatgagcaggag
gccctggatgagcaggacccttctccaccagaggacactgctctctaccctcactctcca
ggcagcaagtttcaacagaataacctcccgcatacgcagccctacactggccccgccgca
cagcacgtcaacaaccctcagcgtcccggcccacgagcacaagagaactgggagcccccc
gaggagacgcctcagcccagccagactaaagactaa

All links

Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UniGene (1)   
   ENSEMBL-DRE (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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