KEGG   Danio rerio (zebrafish): 570901Help
Entry
570901            CDS       T01004                                 

Gene name
smug1, fj81c12, wu:fj81c12
Definition
(RefSeq) single-strand-selective monofunctional uracil-DNA glycosylase 1
  KO
K10800  
single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
Organism
dre  Danio rerio (zebrafish)
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:dre00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    570901 (smug1)
Enzymes [BR:dre01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.-  
     570901 (smug1)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     570901 (smug1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-ProteinID: 
NCBI-GeneID: 
ZFIN: 
Ensembl: 
Vega: 
Position
11
AA seq 277 aa AA seqDB search
MLAQLDTERLESGDASKREVPDLAVERLFNSSTAASRFLQAELELNARLQMLSFGNPVRY
TYNPLEYAWETHQCYVENYCQEGQSVLFLGMNPGPFGMAQTGVPFGEVKAVRNWLKITGR
VGRPADEHPKRRITGLDCTQSEVSGARFWGFFQELCGEPNNFFRHCFVHNLCPLIFMSES
GKNLTPPELPAAERDALLSCCDSALCRVVTALGISMVIGVGKLSEQRARRALSEAGISVR
VEGIMHPSPRNPLANKGWASVARDKLDQLGVLGLLTR
NT seq 834 nt NT seq  +upstreamnt  +downstreamnt
atgttagcacagctcgatacagagaggttggaaagtggagatgcatctaagagagaagtg
cctgatctggctgttgagcggctcttcaacagctccacagccgcttcccggttcttgcag
gctgagctggagctgaacgcccggctgcagatgctgtcctttggaaatcccgtgcggtac
acgtacaaccccctggagtacgcctgggagactcatcagtgttatgtggagaattactgt
caggaggggcagagtgtcctctttctgggcatgaacccgggacccttcggcatggcacaa
actggggttccattcggggaagtgaaagcggttcgcaattggctgaagatcacgggaagg
gtggggcgtccggcagacgagcacccgaagcggcgaatcacaggcctggactgcactcag
agtgaagtgagcggcgctcggttctggggctttttccaggagctctgcggagaaccgaac
aacttcttccgccactgttttgtgcacaacttgtgtcctctgatcttcatgagtgagtcc
ggcaagaacttgacccctcccgagctcccggcggcagagcgagacgctctcctgtcctgc
tgtgactctgccctctgtcgggtcgtcacagcactgggcatctccatggtgatcggggtg
gggaaactgtcagagcagcgtgcccgacgagcgctctcagaggcgggcatcagcgtcagg
gtggaaggcatcatgcatccatcccctagaaacccactggctaataaaggctgggcgagt
gtagcccgagataaactagatcagctgggggttttgggtttgctgactagatga

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