KEGG   Danio rerio (zebrafish): 58107
Entry
58107             CDS       T01004                                 
Symbol
per3
Name
(RefSeq) period circadian protein homolog 3
  KO
K21945  period circadian protein 3
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dre03400]
    58107 (per3)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    58107 (per3)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 58107
NCBI-ProteinID: NP_571659
ZFIN: ZDB-GENE-000804-1
Ensembl: ENSDARG00000010519
UniProt: Q9I8L4
Position
11:39959063..40014818
AA seq 1281 aa
MPGGDGFPDGEQDNSSPGPDIHTGQTDQTSSGQDPGTSGNISASGEEEEAEERIGRRSSG
CEESGGEQTHEDVDMNSTHTSSSGNDSIHHRHHHHHRHHHHHHHHSSSNCSPGSTTGSGS
TKSSKSATGSSSSSFHSTHHTECGEQTETGREHTHREMMHTVQEMKKRLPSEKRSRSKAS
TVEALHYALNCVKQVQANSEYYNLLMSSGLDERRDATVCTLEELEGFTSEHTLKNTDSFV
VVFSLASGKVVYASEQASSVLHCKRKFLESAKFVEMLYHQDVNVFYSHTAQPRLPSWNLG
TDSAAVLFECAQVKSFFCRIRGGKDRDGDMRYSPFRITPYLLKVQGSSGEEEPCCLALAE
RIISGYEAPRIPMDKRIFSTTHSPGCVFLEVDDRAVPLLGYLPQDLIGTSVLTCLHPDDR
LLMLAMHRKIVKYAGQPPFEHSPIRFRCQNGDYVTLDSSWSSFINPWSRKVAFIIGRHKV
RTGPLNEDVFAARSKADQPVTCEDVKELQAMIHKLFLQPVHNNGSSGYGSLGSNGSHEHY
ISVASSSDSNGNLWEDSHRETMTLQQFCADVNKVKNWGQQAYLESRKKLTALGPATAVAG
AGVHASSSHDLGIRDHLKQSLQKARKQPHIPSYQQINCVDSIIRYLESCATSALKRKCES
LSITTSSSSSTSEEDKPTSAAHENTDEAALDAARALDSQVSAGSATTAAVVGAPLTDITI
STEAMSVVSVTSQCSYSSTIVHVPQPESEVTALEDAPMGSEPADSAPAPASPAPDSGSAS
TSQEELLVLGLTKEVLSAHTQKEEQQFVDRFRHRILQSPYSSYLQQDNSSNAHSHHRGDV
VRQPNKHKRPKPEDSSDSYECSQPGNYWSLPGPTAAPHSSWPSSESSQPPPSNIGFVPPM
AVPMQTPPYFNIIGADQQPVMLQPDPGVQNLQPMTPMMVVLLPSFPMYPPNNGMYFPMAA
PGVVPYNIGGFVPPGAPMPAEAPLQGHNLESAGVGVPAEPDSIPEPWFGEDLDAAQPTAL
FSSSRSSSPIQLNLLQEELTKPSEAQTSTNADSLQEPHTKTDDARSECGHQDAHSSSSEM
LDQLLQEDARSGTGSNASGSGSGESGGSLGSGSGLGSNGTSTSHTGSSNSSKYFASNDSS
DTSRKARKSAEAQERERSGFKKHVDDPLWSMIKQTPEPVMLTYQISSRDQAQVLQEDREK
LILMQPMQPWFTSDQKKELAEVHPWIQQNTVPQEINTQGCVSCNTIEPNKKLNLQTDSPN
PPDISCPQDCPPQENRPDTDT
NT seq 3846 nt   +upstreamnt  +downstreamnt
atgccagggggagacggctttcctgatggagagcaggacaactcttctccaggcccagac
atacacacgggccagacggaccaaaccagtagtggccaagaccccgggaccagcgggaac
atttccgcatctggagaggaggaagaggcggaggagcggataggaaggagaagcagcggg
tgtgaagagagcggaggagagcagacgcatgaggatgtggacatgaacagcacccacacc
tccagcagtggaaatgacagcattcatcatcgtcaccaccatcatcatcgtcaccatcat
catcatcatcatcattcctcttccaactgcagccctggcagcaccacgggatcagggagc
actaagagctcaaaatccgccactggttcctcgtcctccagctttcacagcactcatcac
actgaatgcggtgagcagacggagaccgggcgcgagcacacacacagagagatgatgcat
acggtgcaggagatgaagaagcgtctgccgtctgagaagaggagccgcagtaaagccagc
actgtggaggctctgcactacgctctcaactgtgtcaaacaagtacaagcaaacagcgag
tactacaacttactgatgagcagcggcctggacgagagacgggacgccactgtgtgcaca
ctggaggagctggagggattcacttctgaacacacacttaaaaacacggactcttttgtg
gtagttttctctctggcctcggggaaagtggtttatgcgtctgagcaagcctccagtgtg
ctccactgcaagaggaagttcctggaatcggccaagtttgtggagatgctgtaccatcag
gacgtcaatgtgttttactctcataccgcacagccacgactgccatcctggaacttgggc
acagacagcgcggcggttctgtttgaatgtgcgcaggtcaaatccttcttctgtcgaatc
agaggagggaaggaccgggatggagacatgcgctatagtccgttccggatcactccgtac
ctgctgaaggttcagggttccagtggagaggaggaaccgtgttgtctggccctcgccgaa
cgcatcatctcaggatatgaggctcctcgcattcctatggacaagcgcatattcagcacg
actcattcaccaggatgtgtctttttagaagtggatgaccgtgcggtgcctttgctcggc
tacctccctcaagacctgatcggtacctcagtcctgacctgcctgcatccagacgaccgg
ctgctcatgctggccatgcaccgcaaaattgtgaagtacgcgggtcagcctccgtttgag
cattcgcccatccgcttccgctgtcagaacggagattacgtcaccctggactccagctgg
tccagcttcatcaacccatggagccgaaaggtggccttcatcatcggcaggcacaaagtt
cgcactggccctctaaatgaggatgttttcgctgcacggagtaaagccgatcagccagtc
acgtgtgaagatgttaaagagctgcaagccatgatccacaagctgttcctgcagcctgtt
cataataatggatccagtggttatggcagtctgggcagtaacggctctcacgagcactac
atcagcgtggcttcgtccagcgacagtaacggaaacctctgggaggattcgcacagagag
acaatgactctgcagcagttttgtgctgatgttaataaagtgaagaactggggccaacag
gcgtatctggagtcgcggaaaaaactcacagctcttggaccagcaactgcagttgcaggt
gcaggtgttcatgcgagctccagtcacgatttggggattcgggatcatctgaaacagtct
ctgcaaaaggcccggaaacaaccacacattccctcttaccagcagatcaactgtgtggac
agcatcatcagatatctagaaagctgtgctacatcggctcttaaaagaaagtgtgaatct
ttgtccatcactacatcttcctcgtcctccacctcagaagaagacaaacctacatctgct
gcacatgaaaacactgacgaggctgctctggacgccgctcgagctctggacagtcaggtg
tctgcaggttcagccacgacagcagcggtggtcggagctccactaacagacatcaccatc
tccactgaggccatgagtgtggtgtctgtgaccagtcaatgcagctacagcagcaccatc
gtccacgtcccacagcctgagtccgaagtcactgcattagaagacgctccgatgggcagt
gagccagccgactccgcccctgctcctgcaagccccgcccctgattctggctccgcctcc
acgtctcaagaggagctgctggtgctgggactgaccaaagaggtgctgtcggctcacaca
cagaaggaggagcagcagttcgtggaccgattccgccatcgtatcctgcagagtccatac
agctcgtacctgcagcaggacaacagcagcaatgcacattcacatcacagaggggatgtt
gttcgtcaaccaaataaacacaagcgtcccaaaccagaggattcgtccgacagctatgaa
tgctctcagccgggcaactactggtctcttccaggacccacagcggcgcctcactcctcc
tggccgtcctcagagtcctctcagcctccgccatccaacatcggctttgtgccacccatg
gcagtgcccatgcaaacacccccatacttcaacatcataggtgcggatcagcagcccgtc
atgctccagcctgatccaggagtccagaacctccagccaatgacacccatgatggtggtc
ctgcttcccagcttccccatgtaccccccgaacaatggcatgtattttcctatggcggca
ccaggggtggttccctataacataggcggcttcgtcccgcctggagcccctatgcctgct
gaggctccgttgcagggtcataacctggagtctgctggagtcggggtgccagcagagccg
gactctatccctgagccgtggtttggggaggatctggatgcagctcagcccactgcgctg
ttctccagctctcgctccagttcccccatccagctcaatctgctgcaggaggagctgacc
aaacccagcgaagcacagacctccactaatgctgacagtctgcaggaaccccacaccaaa
acggatgatgctcggagtgagtgtggtcatcaggacgctcactcgtcctccagtgagatg
ctggatcagctgctgcaggaagacgctcgctccggcaccggctccaatgcctcaggaagt
ggctccggagagtctggaggatccctgggctctggatcaggactaggctcaaacgggacg
tctaccagccacactggcagcagcaacagcagcaagtatttcgccagcaacgattcctca
gacacgtcccggaaagcacgcaaatccgccgaggcccaggaacgagagcgaagcggcttc
aagaaacatgtggacgaccctctgtggagcatgatcaagcagacgcccgaacccgtcatg
ttaacctaccagatcagctccagggatcaggctcaggttcttcaggaggatcgagaaaaa
ctgattctgatgcagcccatgcagccttggttcacttcggaccagaagaaggagctggcc
gaggttcatccctggatccagcagaacaccgtcccgcaggagatcaacacacagggttgt
gtaagttgtaacacaatagagccgaataagaagctgaatcttcaaacggactctccaaac
cctcctgacatctcttgtccacaagactgtccaccacaggaaaacagacccgatacagac
acctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (51)   
   KEGG ORTHOLOGY (1)   
   RefGene (45)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (66)   

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