KEGG   Danio rerio (zebrafish): 751713
Entry
751713            CDS       T01004                                 
Symbol
gtf2h5
Name
(RefSeq) general transcription factor IIH subunit 5
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03022  Basal transcription factors
dre03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    751713 (gtf2h5)
  09124 Replication and repair
   03420 Nucleotide excision repair
    751713 (gtf2h5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dre03021]
    751713 (gtf2h5)
   03400 DNA repair and recombination proteins [BR:dre03400]
    751713 (gtf2h5)
Transcription machinery [BR:dre03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     751713 (gtf2h5)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     751713 (gtf2h5)
SSDB
Motif
Pfam: Tfb5
Other DBs
NCBI-GeneID: 751713
NCBI-ProteinID: NP_001127834
ZFIN: ZDB-GENE-041001-144
Ensembl: ENSDARG00000056099
UniProt: Q5SNQ6
Position
20:complement(26045253..26047792)
AA seq 71 aa
MVNVLKGVLVECDPAMKQFLLYLDETSALGKKFIIQDLDDTHVFILAEVVQILQERVGEL
MDQNSFPITQK
NT seq 216 nt   +upstreamnt  +downstreamnt
atggtcaacgtgttgaaaggagttctcgttgaatgtgatccagctatgaagcagtttcta
ctatatctggatgagacgtcagctttggggaagaaattcatcatccaggatttggacgac
acgcatgttttcatcttagctgaagttgtgcagattctccaggagcgagtaggagaactg
atggaccagaattcatttcccatcacccagaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (16)   
   RefSeq(nuc) (4)   
   GenBank (6)   
   EMBL (6)   
Protein domain (1)   
   Pfam (1)   
All databases (43)   

Download RDF
DBGET integrated database retrieval system