KEGG   Danio rerio (zebrafish): 793295
Entry
793295            CDS       T01004                                 
Symbol
rnf180b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
  KO
K15708  E3 ubiquitin-protein ligase RNF180 [EC:2.3.2.27]
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dre04121]
    793295 (rnf180b)
Enzymes [BR:dre01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     793295 (rnf180b)
Ubiquitin system [BR:dre04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    793295 (rnf180b)
SSDB
Motif
Pfam: RNF180_C zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 C1_2
Other DBs
NCBI-GeneID: 793295
NCBI-ProteinID: NP_001103874
ZFIN: ZDB-GENE-040426-1620
Ensembl: ENSDARG00000057101
UniProt: A8WGN5
Position
21:complement(20940064..20945658)
AA seq 458 aa
MATSLVTEDQDQSRTVENSTNLRCRKCRRCLIDTTSLLKVVTSTEAAATCNVWHLNIEFL
PDWILASVDQASWTIGKLNCQVCRARLGGFNFINCSKCTCGLDTTVHLSKSRVDQDFKAP
VMLTRPGRTREHDVGRRNNDAESQTISSSPSTSSNVSFSCTVPHVVSAAETEFESSREQQ
IPNTVERHTDLPLLYELPPQVSDYQERIEEQHADFDSRTSLDGAVDQEVVRLGVMEEPLR
NVSPNLEPKLSKREKNRLKSLRRKQRKKERWVQRQQEAKDLAMKWDLTGSDDEERDGYTC
AVCLDVYYSPYKCHPCNHVFCEPCLRTLAKNRPSNTPCPLCRTLISHVLFQEELNQTTKT
CFPKVYRSRHETFQKINYSKWPLPNCPKRFRIFWGFQRHGGPANRWQFPHRAFGLDALDW
GDMWGWPFDIDFVIISVYSLHWVMAFIIFCGLCYFLLL
NT seq 1377 nt   +upstreamnt  +downstreamnt
atggctacctctctcgtgactgaagatcaggatcaatcaagaacagtagaaaattcaaca
aaccttcgctgcagaaagtgccgcagatgtctaatagacacaaccagccttcttaaggtt
gttacatcaacagaagctgcagccacatgcaatgtgtggcatttaaacattgaatttttg
ccagattggattttagcaagtgttgatcaggccagttggaccatcgggaaattaaactgt
caagtctgtagagctcgcttaggaggttttaatttcataaactgctctaaatgtacctgc
ggacttgatacaactgtgcatctcagtaagagtcgcgttgatcaggattttaaagctccg
gttatgttgacaagaccaggaaggactagagaacatgatgtgggaaggaggaataatgat
gctgagtctcaaacaataagctcatctccatctacttcctcaaacgtcagtttctcctgt
actgtacctcatgtagtctctgctgctgaaacggaatttgagtcaagtagagagcaacag
attcctaatactgttgagagacacacagatcttcctttactttatgaactgccacctcaa
gtgtctgattatcaggagagaatcgaggaacagcatgcggattttgatagcagaacctct
ctggatggtgcagtagatcaagaagtggtcagacttggagtgatggaggagccattaaga
aatgtctcacccaacctagagccaaagctttccaagagagagaaaaaccgcctgaaaagc
ttaagaaggaagcaaaggaagaaggaacgctgggttcagagacagcaggaggccaaagat
ctggcaatgaagtgggacctgactggcagcgatgatgaggaaagagatggatacacatgt
gccgtgtgtttagatgtgtattacagtccctacaagtgccatccttgcaatcatgtgttc
tgtgagccctgtttgagaactctggctaagaacaggccaagcaataccccctgtccactt
tgtaggacccttatatcccatgtgctcttccaagaagagcttaatcaaactacaaaaact
tgcttcccgaaagtgtatcgttcaagacatgagacctttcagaagatcaactattccaaa
tggcctctgcccaactgtccgaagcgctttcgcatcttttgggggtttcagagacatgga
ggcccagccaatcgctggcagtttccccacagagcgtttggcttggatgcgttggattgg
ggagacatgtggggctggccgtttgacattgactttgtgatcatctctgtttactctctg
cactgggtgatggccttcatcatcttctgtggcctctgctacttcctcctcctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (58)   
   KEGG ORTHOLOGY (1)   
   RefGene (52)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (78)   

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