KEGG   Danio rerio (zebrafish): 795335
Entry
795335            CDS       T01004                                 
Symbol
lmod1b
Name
(RefSeq) leiomodin-1
  KO
K22030  leiomodin
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    795335 (lmod1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:dre04812]
    795335 (lmod1b)
Cytoskeleton proteins [BR:dre04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     795335 (lmod1b)
SSDB
Motif
Pfam: WH2 Fim1C-like_C
Other DBs
NCBI-GeneID: 795335
NCBI-ProteinID: XP_001335496
ZFIN: ZDB-GENE-141215-22
Ensembl: ENSDARG00000077261
UniProt: E7F062 A0A8M1Q744
Position
11:24888942..24895937
AA seq 671 aa
MSRRKVKGLTKTGRQVSEDPELDSLLSNLSTAEMEELEKEVSVVPDPDPSEIIVVDQTDL
KPSAPVRKESQLSSQTDDFKSRFQRNLTTEVEPKKESRKQEYLRKMGLSQEKNISASDSR
DGGLQRTSSTSSFPKRDGRLEDRTRRVTEGTRDEKFGPSAVSKRDEEIEKKNDTKDQNDG
SRLRDRREMRESSSSKTKELISKLQEKKEDSKEKNKKEDRGKRESGESRAKEMISRIQEK
EEKEREKKEEIRKREETKSKGYLSRLEENQNQVHEDKTKEENKHRDEKQIRSSEKVKETT
ALSENKEKESENVKRLQECNAKSSDKGRGDVQKHNENVNEVHKPKEEKIENCVSDTILKG
KTKEEEEDDESASMFDEDLEKVRRNDPGMTDLNVNNSEVIKTKTLIQFSEALKNNTHIKA
FSLANCRADDHVAYAIADTLRNNKSITSINLDSNLLTSKGIMSLIQALQHNSTLTELRFH
NQRHIIGGKSEMEMTKILKENTTLLKLGYHFELAGPRMTMTNILSRNMDRQRQKRLQEQK
QAQAQGAGDKKDSLGVPKPSFGKGSPRASPIPSPIPSPAPSPKLTHKKRVSGLVGGPPPP
PPPPGGPPPPPPPMLDGDFLKNSLTPVSQRKLDDRSGGRGAAQNTRDQLLASIRNSNVKQ
LKKVAVPKLLQ
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgtcaaggaggaaagtgaagggactcactaaaaccggcagacaggtgagtgaggacccg
gaactcgacagtttactgtcaaacctgtcgactgcagaaatggaagagttggagaaagag
gtgtcggttgttcccgatccagatccgagtgaaattatcgttgtggaccaaacggattta
aaaccaagcgctccggttagaaaggaatcgcaactgagcagccagaccgacgacttcaaa
tcccgcttccagagaaacctgacaactgaggtagagccgaagaaggagagccggaagcaa
gagtatctgcgtaagatgggcctgagccaagagaaaaatatctctgcatctgacagcaga
gatggaggacttcagaggacgtcctccacctcttccttccctaaacgtgatggtagattg
gaggacaggacccgcagagtcacagaaggcaccagagatgaaaaattcggcccatctgct
gtttccaagagagacgaggagattgagaaaaaaaatgacacaaaggaccaaaacgatggg
agtagattaagagacagaagagagatgagagaaagtagcagcagcaaaaccaaagaatta
atttccaagcttcaagagaaaaaggaggatagtaaagagaaaaataaaaaagaagacaga
gggaagagggaatctggagaaagtagagcaaaggagatgatttctaggatacaagagaaa
gaggagaaggaacgggagaaaaaggaagagattagaaagagagaggagactaagagtaaa
ggctatttatccaggttagaggagaatcaaaatcaggttcatgaagacaagacgaaagaa
gagaataagcacagggatgaaaaacaaataaggtcaagcgaaaaggtaaaagagactact
gcattgtctgaaaataaagagaaagaatctgaaaatgtaaaaaggcttcaggaatgcaat
gcaaaatcaagtgacaaaggaagaggggatgttcagaaacacaatgaaaatgtaaatgaa
gttcataaaccaaaagaagagaaaattgaaaactgtgtctcggacactattttgaaaggt
aagaccaaagaggaggaagaagatgacgagtcagccagcatgtttgatgaagatctggaa
aaagttcgtcgcaatgacccaggcatgactgatctcaacgtgaacaattctgaggtcata
aaaaccaaaactcttattcagttctctgaggcattgaaaaacaacacgcacatcaaagca
ttttctttggcaaactgtcgcgctgatgaccatgtggcttacgctattgctgacacctta
cgcaacaacaaaagcatcactagcatcaatctggactccaatcttcttactagcaaaggc
atcatgtctctgattcaagcccttcaacacaactccacactcactgagctacgtttccac
aaccagcgacacattatcggaggaaaatctgagatggagatgaccaaaattttgaaagaa
aataccactctactaaaactaggttatcactttgagttagctggacctcgtatgaccatg
accaatattcttagtcggaatatggaccgtcagcggcaaaaacggctccaggagcagaag
caagctcaagcacaaggagctggagacaagaaagattcattaggagttccaaaacccagc
tttggtaaaggctcccccagagcatcaccaataccttcacccataccgtcacctgctccg
tcacccaagttgactcataagaaaagggtaagtgggcttgttggtggaccaccacctcct
ccaccaccacctggaggaccaccgccacctccaccaccaatgctggacggagactttctg
aagaactccttaacgcctgtgtctcagaggaagctggacgacaggagtggaggaagagga
gcagctcaaaacacacgggaccaacttctagcttccattaggaacagcaatgttaagcag
ctcaaaaaggttgcagtaccaaagcttttgcagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (48)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (60)   

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