KEGG   Danio rerio (zebrafish): 563884
Entry
563884            CDS       T01004                                 
Symbol
tgfb1b
Name
(RefSeq) transforming growth factor beta-1
  KO
K13375  transforming growth factor beta-1
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04010  MAPK signaling pathway
dre04060  Cytokine-cytokine receptor interaction
dre04068  FoxO signaling pathway
dre04110  Cell cycle
dre04148  Efferocytosis
dre04218  Cellular senescence
dre04350  TGF-beta signaling pathway
dre04672  Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    563884 (tgfb1b)
   04350 TGF-beta signaling pathway
    563884 (tgfb1b)
   04068 FoxO signaling pathway
    563884 (tgfb1b)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    563884 (tgfb1b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    563884 (tgfb1b)
  09143 Cell growth and death
   04110 Cell cycle
    563884 (tgfb1b)
   04218 Cellular senescence
    563884 (tgfb1b)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    563884 (tgfb1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:dre03110]
    563884 (tgfb1b)
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:dre04052]
    563884 (tgfb1b)
   00536 Glycosaminoglycan binding proteins [BR:dre00536]
    563884 (tgfb1b)
Chaperones and folding catalysts [BR:dre03110]
 Intramolecular chaperones
  Others
   563884 (tgfb1b)
Cytokines and neuropeptides [BR:dre04052]
 Cytokines
  Transforming growth factors (RSTK binding)
   563884 (tgfb1b)
Glycosaminoglycan binding proteins [BR:dre00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   563884 (tgfb1b)
SSDB
Motif
Pfam: TGFb_propeptide TGF_beta
Other DBs
NCBI-GeneID: 563884
NCBI-ProteinID: XP_692338
ZFIN: ZDB-GENE-091028-1
Ensembl: ENSDARG00000034895
UniProt: E9QHW0
Position
21:21620150..21630025
AA seq 379 aa
MKAESLLLALQCLLGFVQYSRALSTCNPLDLELIKRKRIEAIRGQILSKLRLPKEPEVEE
KELIENIPAELISVYNSTMELNEEQAANPVQHTIEDPTEEEYYAKEIHKFTMMEEKPEKY
LVFNITDIKHKLGANHVLYQAEFRLRIKEPKMGDSEQRLELYQVTGNKSRYLNSRFISLQ
TAGKWVSFDVTSTLKDWLQMPEEKQEFQLQLACSCKPESQNTEFLFKIAGLSRNRGDTGL
LADQVAKPYILVMSHPADGHSPAKSRRKRETDAVCTEKSEGCCVRSLYIDFRKDLGWKWI
HEPSGYYANYCTGSCSYVWTSENKYSQVLALYRHHNPGASAQPCCVPQVLDPLPIIYYVG
RQHKVEQLSNMIVKTCKCC
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgaaggcggagagtttattactggcattgcaatgtctgttgggatttgtgcaatacagc
agagcgctgtcaacatgcaatcctttagacctggaactgatcaagagaaagcgcatcgaa
gccattcgtggacagattctcagcaaactacgactgcccaaggaaccagaagtagaagag
aaggagttgattgaaaacatcccagcagaactgatctcagtgtacaacagcaccatggag
ctcaatgaggagcaggcagcgaacccagttcagcacaccatagaagatccaacagaggag
gaatactatgctaaagagattcacaagttcacaatgatggaggaaaaaccagaaaagtac
ttagttttcaacatcacagatataaagcacaaactgggtgcaaatcatgtgctctaccag
gccgagtttcgactgcgcatcaaggaacctaaaatgggggattcagagcagagactggag
ctgtaccaggtcactgggaacaaatcacgctacctgaactcacgcttcatttcccttcaa
acggctggcaagtgggtgtcgtttgatgtgacgtccaccctgaaagactggttgcagatg
cctgaggagaagcaggagtttcagctgcagctggcctgtagctgcaagcccgagtctcag
aacactgaatttttatttaaaatagcaggtttgtcccgcaatagaggtgatacgggcctc
ttagcggaccaagtggcaaagccttacattttggtgatgtcacatcctgctgatggccac
agcccagcaaaatcgcgcagaaaacgggaaacagatgctgtttgtactgaaaagtctgag
ggttgctgtgttagaagtctgtacattgacttccgcaaagacctgggctggaagtggatt
catgaaccttccggttactatgccaattattgcactggctcttgctcctatgtctggaca
tcagaaaataagtactcacaggttcttgcactatataggcatcataatcctggtgcctct
gctcagccctgctgtgtacctcaggttctagacccactgcccatcatttactatgtgggg
agacagcataaggtggaacagttgtcaaatatgattgtgaaaacctgcaagtgttgctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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