KEGG   Desulforamulus reducens: Dred_0207
Entry
Dred_0207         CDS       T00494                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
drm  Desulforamulus reducens
Pathway
drm03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:drm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Dred_0207
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:drm03021]
    Dred_0207
   03400 DNA repair and recombination proteins [BR:drm03400]
    Dred_0207
Enzymes [BR:drm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Dred_0207
Transcription machinery [BR:drm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Dred_0207
DNA repair and recombination proteins [BR:drm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Dred_0207
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_45 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RnfC_N
Other DBs
NCBI-ProteinID: ABO48756
UniProt: A4J103
Position
219996..223433
AA seq 1145 aa
MAYPEKVGNRVRWNYGKLREVLDLPNLIEVQRNSYEWFLQEGLREVFHDISPIQDFTGNL
ILEFLDYTLGEPKYSVEECKERDVTYAAPLRVKVRLINKETGEVKEQEVFMGDFPLMTSK
GTFIINGAERVIVSQLVRSPGVYFADQIDPSGKRLFATTMIPNRGAWLEFETDVNDHIFV
RIDRTRKIPATVLIRALGYGSNALIMELFENDKFVQETLTRDNTDTEEEALVEIYKRLRP
GEPPTVESARSLLNTLFFDPKRYDLAHVGRYKLQKKLKHGILYRYPNGEEGPKEWDRLLN
KEVPVDREFIRELTKEDIIATFRYLLNLMQGEGIVDDIDHLGNRRLRSVGELLQNQFRIG
LSRMERVVRERMTIQDVDVITPQVLINIRPVVASIKEFFGSSQLSQFMDQTNPLAELTHK
RRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLIGSLSTYARINSFGFM
EAPYRKVDKENKRVTDEIVYLTADEEEDHIIAQANAPLDENGYFVEERVNARRGHDTLLV
PTDRVEYMDVSPKQVFSVATSLIPFLEHDDANRALMGANMQRQAVPLLRCQAPVVGTGIE
HRAAKDSGVCIVAERGGEVVRVTATEVAVRTDEGRTDTYKLLKFTRSNQGTCINQKPIVN
KGDRVEEGQILADGPATEQGELALGRNILVAFMTWEGNNYEDAILISEKAVKEDFFTSIH
IEEYECDARDTKLGPEEITRDIPNVGEDILKDLDERGIIRVGAEVRPGDILVGKVTPKGE
TELTAEERLLRAIFGEKAREVRDTSLRVPHGEAGKIVDVKVFSRENGDELPPGVNHLVRC
YIAQKRKISEGDKMAGRHGNKGVVARILPEEDMPFMADGTPVQIVLNPLGVPSRMNIGQV
LETHLGWAAKTLGFNVATPVFNGASEESIWETLRRAELPEDGKTVLYDGRTGEPFDNRVT
VGYIYMIKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYT
LQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGLDVKVLAEDEKE
IEIKEIEEDITETAKELGIELPEERRVSSSKEEIEEEEEVEDNSDEFDETFLEEAEDDFS
LDDED
NT seq 3438 nt   +upstreamnt  +downstreamnt
atggcttacccggaaaaagtaggaaacagggtgaggtggaactacggcaaacttcgtgaa
gtcctggatttgcctaacctgattgaagttcagcgaaattcatacgaatggttcctccag
gaaggtctgagggaagtattccatgacatctctcctattcaggactttactggaaacctg
attctggaattcctggactacactctgggagaaccgaaatattcggtagaagagtgcaag
gaacgcgatgtaacttatgcggccccgttacgggttaaggtgcgccttattaataaggaa
acaggggaagtaaaagaacaagaagtctttatgggagactttcctttaatgaccagcaaa
ggcacctttattattaacggtgcagaacgcgttattgtaagccagttggtacgttctccg
ggagtctattttgctgaccaaatagaccccagtgggaaaagattatttgctaccacaatg
attcctaaccgtggagcatggttagaatttgaaacagatgtcaatgaccatattttcgtt
cgtattgaccgcacccgtaagattccggcaactgtgttaattcgggctttgggctatggc
tcaaatgccttaatcatggaactgtttgaaaatgacaaatttgttcaagagacactaacc
cgtgataacacagacactgaggaagaagcactggttgaaatttataagcgtcttcgtccg
ggggaacctcctacggtagaaagtgcgaggtctctattaaatacattattctttgatcct
aaacgatatgaccttgcccatgtgggacgttataaattacaaaagaaattaaagcacggc
atcctttaccgttatcccaacggtgaagaaggccccaaagaatgggaccgcctattaaat
aaagaagtaccggtggatcgggaatttatccgtgaattaaccaaagaagatattattgca
accttccgttatcttttgaacttaatgcagggtgaaggtattgtggatgatattgaccac
ttaggtaaccgccgattacgttccgtgggtgagttgttacaaaaccagttcagaattggt
ttatctcgtatggaacgggttgtccgggaaagaatgacgattcaggatgtagatgtaata
actccacaagtattaataaacattcgcccggttgtggcatccattaaagagttctttggc
tccagccaattgtctcagtttatggaccaaactaacccactggcggaattaacccacaaa
agacgtctgtcagccttaggtcctggggggttatccagggagcgtgcgggcttcgaagtg
cgtgacgttcaccactctcactatggccgtatgtgtcccattgagacaccggaaggtccc
aacattggtttgattggttcactgtctacctatgctaggattaatagctttggctttatg
gaagcaccctatcgtaaagtagataaagaaaacaaacgtgtaaccgatgaaattgtttat
ttaacggcagatgaagaagaagaccatattatagcccaggctaacgctcctcttgacgaa
aatggttattttgtagaagaaagagtaaatgcccgccggggtcatgatacccttctggta
cccactgaccgtgtagaatacatggacgtatctcctaaacaagtattttccgtagcaacg
tccttaattcccttcttggaacatgacgatgcgaaccgcgccttgatgggcgcaaacatg
caacgtcaggcggtacctctgctcaggtgtcaggcacccgtggtgggtacgggtatagaa
cacagggctgctaaggattctggtgtatgtatagtagcagagagaggcggagaagttgtt
cgggtgaccgccactgaagttgctgtacgtactgacgagggaaggacagacacctataaa
ctcttaaagtttactcgttccaaccagggtacctgcattaaccaaaagcccattgtcaat
aaaggagacagagtggaggaaggccaaatccttgcggatgggccagccactgaacaaggc
gaattagctttgggaagaaatatcctggtagcttttatgacctgggaaggtaacaactac
gaggatgccattctgatcagcgaaaaggctgtaaaagaagattttttcacctcgatccat
atagaagaatatgagtgtgatgccagggataccaaacttggtcccgaagagatcacccgg
gatattcccaatgtgggcgaagatattttaaaagatctggatgaaagaggaattatccgg
gtgggcgctgaggtaagacccggtgatattctagtaggaaaagtaacacccaagggtgaa
acagaactaaccgcagaggaacgattgctccgggcgatctttggtgagaaggccagagag
gtaagagatacctccctcagagtaccccacggggaagccggaaaaattgttgatgttaag
gtgttctctcgggagaatggcgatgaactgccaccaggcgtaaaccatttagtacggtgt
tacattgcccagaagagaaagatttctgagggtgacaaaatggccggtcgtcacggtaac
aaaggggtagtggctcggatcttgcccgaagaagatatgccctttatggcggatggaact
ccggtacaaattgtactgaacccattgggtgtaccgtcccgtatgaacatcggtcaggtt
ttagaaactcacctaggttgggctgctaaaacactagggttcaatgtagcaacaccggta
tttaacggcgcatctgaagaatctatctgggaaaccctgagacgtgctgaactacccgaa
gacggaaaaactgttctctacgatggtagaaccggggaaccctttgataatagggtcacc
gttggatatatctacatgataaaactgcaccacctggtggatgacaagattcacgcccgg
tccactggtccatactctttggtcacccagcaacctctgggcggtaaggctcagtttggt
ggacagcgttttggtgagatggaggtatgggcgctggaggcttacggtgcagcctatacg
cttcaagagattcttaccgttaagtccgacgatgtagtgggtcgggttaagacctatgaa
gccattgtaaagggagaaaatgtacctgaaccaggggttccggagtccttcaaggtacta
atcaaggaactgcagtcccttggattagacgtcaaggtgctcgctgaagatgagaaggaa
attgaaatcaaggaaattgaagaggatataactgaaaccgcaaaagaactggggattgaa
ctacccgaagaaagaagggtaagctcttccaaagaagaaattgaagaggaagaggaagtt
gaagataattctgacgaatttgatgaaactttcctggaagaagctgaagacgacttcagt
ttggatgacgaggactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (51)   

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