KEGG   Desulfohalobium retbaense: Dret_0125Help
Entry
Dret_0125         CDS       T00989                                 

Gene name
trpA
Definition
tryptophan synthase subunit alpha (EC:4.2.1.20)
Orthology
K01695  
tryptophan synthase alpha chain [EC:4.2.1.20]
Organism
drt  Desulfohalobium retbaense
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Class
Metabolism; Overview; Biosynthesis of amino acids [PATH:drt01230]
Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:drt00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:drt00400]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
164400..165167
Genome map
AA seq 255 aa AA seqDB search
MHTSVLTEAVDKAHKAGRHALIPFLPAGFPDPERFWEVLRELDAQGADIIEIGVPFSDPV
ADGPLIEAVSLQCLADGVDLDWILDGLERMAGQLATPIVCMGYYNPFWQYGMARFAERAA
QAGVAGCIVPDLPLEEAGPFQEVLNAQGMDLIRMIGVNTSEERMRAYAKNGSGFVYMVAA
LGITGTQAGFPPQLPQALSRAQDIFDDPIALGFGLERKEQLGEIRDLVDAVVFGSSLIRH
VQGGGEVRTFLQRWH
NT seq 768 nt NT seq  +upstreamnt  +downstreamnt
atgcatacatcagtgttgaccgaggccgttgacaaggctcacaaggccgggcgccacgcc
ctgatcccgtttcttccggccggatttcccgacccggaacggttttgggaggttttgcgg
gagctggacgcgcaaggtgcagatattattgagataggagtcccgttttccgatcccgtg
gccgatggtccacttattgaggccgtttcgttgcagtgcctggccgacggcgttgatctg
gactggatattggacggattggagcgtatggcggggcaattggcgaccccgatcgtgtgt
atggggtattataatcccttttggcaatacggcatggcccgttttgcggagcgagccgcc
caggcgggggtggccgggtgcattgtcccggatctgccgctggaggaggccgggccgttt
caagaggtactcaatgcacaaggaatggacctcatccgcatgatcggcgtgaatacctct
gaagagcggatgcgagcctatgccaaaaatggcagcggttttgtgtatatggttgcggca
ctgggcatcactggcacacaagccgggttcccgccgcaattgcctcaggcgctttcccgt
gcccaggacatttttgacgatcccattgctctggggttcggattggagcgtaaggaacaa
ctgggtgagatacgcgacctggtcgatgcggtggtcttcggcagcagtttgatccggcat
gtgcaaggcggcggggaggtcaggacatttttgcagagatggcactga

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