KEGG   Desulfohalobium retbaense: Dret_0254Help
Entry
Dret_0254         CDS       T00989                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
drt  Desulfohalobium retbaense
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:drt00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Dret_0254
Enzymes [BR:drt01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Dret_0254
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Dret_0254
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
317658..318482
Genome map
AA seq 274 aa AA seqDB search
MPELPEVETIARGLDAALTGQHIASVHLRRDAVACGDAQRIREDVPGRCIKRVWRRAKLL
LVDCVPDRHLVFHLKMSGKLLLGGPLAGQEKHVQAWFGLQSGESFVFQDVRKFGYIRLFD
GAELAKWPFFASLGPEPFDLDGPGFARILSGRRARIKSLLLDQTVIAGIGNIYADEALFR
AGIHPATPADRLSPGALNRLVYALHAALNKGFASGGSSLRDYVDALGKRGSHQNEFQVYG
RCGASCPCCGRCLERTTVAGRTSTFCPRCQPLSD
NT seq 825 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattgccagaagtggaaaccatcgcccgggggctcgatgcggctctcacgggg
cagcatatcgccagcgtgcatctgcgccgtgatgcggtcgcctgcggtgatgcacagcgg
atacgcgaggatgtcccggggcggtgtatcaagcgggtctggcggcgggcgaaattgctg
cttgtggattgtgttcccgatcggcacctggtcttccatctcaaaatgagcggcaagctc
ctgctcggcggtccccttgccggacaggaaaagcacgtccaggcctggttcgggctgcaa
agcggcgaatcctttgtctttcaggatgtccgcaagtttgggtatatccggctctttgac
ggggctgaactcgccaagtggccgtttttcgccagtctgggcccggaacctttcgacctc
gacggccccggctttgcccggatcctgtccggacgccgggcgcggatcaagagtctgctg
ctcgaccagacggtcatcgccgggatcggcaatatttacgccgatgaagcgttgtttcgc
gccggcatccaccccgctacaccggcggatcgcctttccccgggagccctgaatcgtttg
gtctacgccctgcatgcggccctgaataagggattcgcttcgggcggctcctcgctgcgc
gattacgtcgacgccctgggcaagcggggctcccaccagaatgaattccaggtctacggg
cgatgcggtgcatcatgtccctgttgcggtcgctgtctggagcgaaccaccgtggccggc
aggacctcgaccttttgcccccggtgtcaacccctttctgactaa

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