KEGG   Desulfovibrio salexigens: Desal_0043Help
Entry
Desal_0043        CDS       T00969                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
dsa  Desulfovibrio salexigens
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:dsa00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Desal_0043
Enzymes [BR:dsa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Desal_0043
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Desal_0043
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
45992..46816
Genome map
AA seq 274 aa AA seqDB search
MPELPEVEVISRGLAESLEGKTIESVKILNHSSVKMPWYLFSSRVAGEKITRIHRRAKLL
IMDLGDDLHITFHLKMTGRVLAHEGPTTPEPHTRIVFGLTDGGSIEFHDTRKFGEVRALN
NEELQEWDFYKNLGPEPLEVTAEELAERITGRKAQIKGLLLNQSVVAGCGNIYADESLFR
SGIHPKAKASDLSNESLVKLFTELQAVLKQAIQENGSSIRDYVDAGGDAGGFQNSFKVYG
KKGEPCPDCGKIFEGATVAGRTSTFCSNCQKMKD
NT seq 825 nt NT seq  +upstreamnt  +downstreamnt
atgccagaattgccggaagtagaagtaatctcccgtggtcttgccgaatctcttgaaggc
aagacaattgaatctgttaaaattctcaaccacagttctgtaaaaatgccgtggtatctg
ttttcctctcgcgtggcaggggagaagattacccgcattcatcgtcgcgctaagttgctg
atcatggatcttggcgatgatttgcatataacctttcatcttaagatgaccggaagggtc
cttgctcatgaaggcccaaccaccccagagccgcacacccgtattgttttcggtcttacc
gacggcggttctattgaatttcacgatacccgcaaattcggagaagtacgcgcattgaac
aatgaagagcttcaggaatgggatttttataagaatctcggtcccgagcctctggaagta
acagccgaagaactcgcggaacgtatcaccggacgcaaggcccagatcaagggcttactg
ctcaatcagtccgtagtggccgggtgcggaaacatttatgctgacgaatccctgtttcgt
tccggcattcatcccaaggcaaaggcatccgatctttctaatgaatctctggtgaaactg
ttcactgaattgcaggctgtgcttaagcaggcaattcaggaaaacggtagttccatccgc
gattacgtggatgcgggcggtgatgccggaggctttcagaacagttttaaagtttatggc
aagaaaggcgagccctgtcccgattgcgggaagatatttgaaggcgctaccgtcgcggga
cgtacttccactttttgcagtaattgtcagaaaatgaaggattag

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